farhangus / Sniffles2_plotLinks
☆31Updated last year
Alternatives and similar repositories for Sniffles2_plot
Users that are interested in Sniffles2_plot are comparing it to the libraries listed below
Sorting:
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Variant annotation and merging pipeline☆39Updated 3 months ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆43Updated last year
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- ☆43Updated last year
- ☆31Updated 5 years ago
- SV calling for diploid assemblies☆29Updated last year
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆38Updated last year
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆34Updated 2 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- A battery of methylation tools for PacBio HiFi reads☆43Updated last month
- ☆36Updated last year
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- ☆31Updated 9 months ago
- Working space for the GIAB TR benchmarking project☆22Updated last year
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated last week
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 7 months ago
- ☆38Updated 3 weeks ago
- ☆49Updated last year
- ☆81Updated 7 months ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- ☆36Updated 3 months ago
- Using de-novo assembly and read-phasing to assemble reference-free diploid genomes☆24Updated last month
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 4 months ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago
- ☆32Updated last year
- ☆30Updated 4 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago