farhangus / Sniffles2_plotLinks
☆33Updated last year
Alternatives and similar repositories for Sniffles2_plot
Users that are interested in Sniffles2_plot are comparing it to the libraries listed below
Sorting:
- Variant annotation and merging pipeline☆42Updated 6 months ago
- Code for phasing SVs with SNPs☆53Updated 5 years ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆47Updated last year
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆39Updated 2 months ago
- ☆44Updated last year
- ☆31Updated 6 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Updated 2 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- A battery of methylation tools for PacBio HiFi reads☆48Updated 2 months ago
- SV calling for diploid assemblies☆30Updated last year
- A module for improving the insertion sequences of structural variant calls☆33Updated 4 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- ☆36Updated last year
- methods for orphan gene prediction paper optimization☆25Updated 4 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆54Updated 11 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 4 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago
- ☆78Updated 5 years ago
- ☆51Updated last year
- A pipeline for isoseq☆23Updated 7 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- ☆38Updated last month
- Working space for the GIAB TR benchmarking project☆23Updated last year
- ☆38Updated 4 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 2 months ago
- SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome.☆19Updated 2 years ago
- ☆39Updated 2 years ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆60Updated last week