mingjingsi / FIRMLinks
Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets
☆12Updated 2 years ago
Alternatives and similar repositories for FIRM
Users that are interested in FIRM are comparing it to the libraries listed below
Sorting:
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆14Updated 6 months ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- R package of CSOmap(developing☆14Updated 3 years ago
- ☆9Updated 10 months ago
- ☆13Updated 7 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆19Updated last year
- ☆14Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆31Updated 9 months ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 5 years ago
- The codes and files for the study of subsolid nodules (SSN).☆14Updated 4 years ago
- ☆17Updated 2 years ago
- ☆12Updated 5 years ago
- ☆34Updated last year
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- ☆13Updated 3 months ago
- ☆11Updated 2 months ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆22Updated 2 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- ☆16Updated 4 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago
- python API to the CoGAPS NMF package☆19Updated 2 weeks ago
- ☆20Updated last year
- ☆13Updated 10 months ago
- Computational pipeline to process EasySci-RNA data.☆20Updated last year
- The million-scale method for single-cell analysis☆10Updated last year
- ☆18Updated 2 years ago