aristoteleo / dynast-releaseLinks
Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments
☆18Updated last month
Alternatives and similar repositories for dynast-release
Users that are interested in dynast-release are comparing it to the libraries listed below
Sorting:
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Updated 5 years ago
- R package for metabolic enzyme enrichment anaylsis☆12Updated 11 months ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆11Updated last year
- scOpen: single-cell open chromatin analysis via NMF modelling☆28Updated 2 years ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated last year
- Harmony framework for connecting scRNA-seq data from discrete time points☆51Updated last year
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆22Updated last year
- Bayesian model for RNA velocity estimation of periodic manifolds☆33Updated last year
- TF analysis from epigenetic and Hi-C data☆18Updated 6 months ago
- ☆28Updated 2 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆36Updated 3 years ago
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆26Updated last year
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition☆19Updated 2 years ago
- A toolset for analysis and visualisation of Spatial Transcriptomics datasets.☆18Updated 4 years ago
- Automated marker-based annotation of cell types☆13Updated 3 years ago
- High-definition modeling of chromatin + transcriptomics data☆25Updated 5 months ago
- Information-based dimensionality reduction☆29Updated 9 months ago
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆16Updated 2 years ago
- The scripts used for the analyses in TOME project☆25Updated 10 months ago
- Code, data and analysis for moslin.☆15Updated last year
- This repository contains codes used for the human fetal limb cell atlas.☆17Updated 8 months ago
- ☆12Updated 4 years ago
- Biology-centered data-driven quality control for scRNA-seq☆18Updated 2 years ago
- MultiMAP for integration of single cell multi-omics☆56Updated last year
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Toolkit for single-cell DNA methylation analysis.☆42Updated this week
- mouse_fullStack_annotations☆12Updated 2 years ago
- Perturb-seq analysis package☆14Updated last year