MarieOestreich / hCoCena
☆16Updated last month
Alternatives and similar repositories for hCoCena:
Users that are interested in hCoCena are comparing it to the libraries listed below
- single cell Gene co-Expression Network Analysis☆9Updated 2 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- ☆20Updated last year
- Inference of TCR motifs☆29Updated 2 weeks ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Updated last year
- ☆37Updated 3 years ago
- Individual level Differential Expression Analysis for Single cells☆23Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆40Updated last year
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 2 years ago
- ☆12Updated 10 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆24Updated 3 years ago
- ☆18Updated last year
- ☆16Updated 2 weeks ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆21Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 3 years ago
- ☆11Updated last month
- SpaceX: Gene Co-expression Network Estimation for Spatial Transcriptomics☆19Updated last year
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- Improved Ribo-seq enables identification of cryptic translation events☆13Updated 7 years ago
- ☆16Updated last year
- ☆46Updated 8 months ago
- ☆24Updated 5 months ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 3 weeks ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated 11 months ago
- ☆22Updated 2 years ago