MarieOestreich / hCoCenaLinks
☆16Updated 8 months ago
Alternatives and similar repositories for hCoCena
Users that are interested in hCoCena are comparing it to the libraries listed below
Sorting:
- Improved Ribo-seq enables identification of cryptic translation events☆16Updated 7 years ago
- ☆13Updated 6 months ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSC…☆12Updated last year
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Updated 2 years ago
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆23Updated 3 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Updated 2 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- ☆20Updated 2 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated 2 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Updated 3 years ago
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆16Updated 5 years ago
- Perturb-seq analysis package☆14Updated last year
- Gene Expression Decomposition and Integration☆19Updated 7 months ago
- Paired-seq☆14Updated last year
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- ☆10Updated 4 months ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Updated 2 years ago
- ☆10Updated 3 years ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year
- Detecting cancer subtypes with machine learning.☆10Updated 5 years ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Updated 5 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated 11 months ago
- python API to the CoGAPS NMF package☆19Updated 4 months ago