Alternatives and similar repositories for BSDE

Users that are interested in BSDE are comparing it to the libraries listed below

• epigen / scifiRNA-seq_publication
  The million-scale method for single-cell analysis
  ☆10Updated last year
• gambalab / gficf
  An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
  ☆18Updated last year
• veltenlab / mitoClone
  ☆12Updated 4 years ago
• dpeerlab / seqc
  Single-Cell Sequencing Quality Control and Processing Software
  ☆16Updated 3 years ago
• vincenthahaut / FLASH-Seq
  ☆10Updated 3 years ago
• Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel
  ☆15Updated 2 years ago
• wgmao / NIFA
  Non-negative Independent Factor Analysis for single cell RNA-seq
  ☆11Updated 3 years ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• ML4BM-Lab / ELATUS
  ☆11Updated 2 months ago
• cole-trapnell-lab / pseudospace
  ☆12Updated 5 years ago
• skinnider / SCT-MoA
  Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"
  ☆14Updated 6 years ago
• debsin / dropClust
  Version 2.1.0 released
  ☆23Updated 5 years ago
• PoolLab / ReferenceEnhancer
  ☆20Updated last year
• woojunshim / TRIAGE
  Transcriptional Regulatory Inference Analysis from Gene Expression (TRIAGE)
  ☆9Updated last year
• mingjingsi / FIRM
  Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets
  ☆12Updated 2 years ago
• reedliu / scRNA-codes
  ☆17Updated 5 years ago
• semraulab / phiclust
  A clusterability measure for scRNA-seq data.
  ☆18Updated 3 years ago
• juliaolivieri / SpliZ_pipeline
  Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis
  ☆33Updated 3 years ago
• mhu10 / scPanoView
  ☆11Updated 5 years ago
• raphael-group / netNMF-sc
  netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data
  ☆23Updated 4 years ago
• salzman-lab / SICILIAN
  ☆22Updated 11 months ago
• gxiaolab / scAllele
  ☆34Updated last year
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆17Updated 3 months ago
• FertigLab / pycogaps
  python API to the CoGAPS NMF package
  ☆19Updated 2 weeks ago
• federicogiorgi / corto
  corto (Correlation Tool): an R package to generate correlation-based DPI networks
  ☆20Updated 2 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆12Updated 2 years ago
• bjstewart1 / kidney_sc_immune
  Repository for scRNAseq study of human kidneys
  ☆15Updated 5 years ago
• davemcg / scEiaD
  Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas
  ☆25Updated last year
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆21Updated last year
• scottzijiezhang / MeRIPtools
  ☆8Updated 3 years ago