Alternatives and similar repositories for BSDE

Users that are interested in BSDE are comparing it to the libraries listed below

• epigen / scifiRNA-seq_publication
  The million-scale method for single-cell analysis
  ☆10Updated last year
• gambalab / gficf
  An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
  ☆18Updated last year
• skinnider / SCT-MoA
  Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"
  ☆14Updated 6 years ago
• veltenlab / mitoClone
  ☆12Updated 4 years ago
• vincenthahaut / FLASH-Seq
  ☆10Updated 3 years ago
• gxiaolab / scAllele
  ☆34Updated last year
• dpeerlab / seqc
  Single-Cell Sequencing Quality Control and Processing Software
  ☆16Updated 3 years ago
• GreenleafLab / ChrAccR
  Analyzing chromatin accessibility data in R
  ☆18Updated 2 years ago
• mhu10 / scPanoView
  ☆11Updated 5 years ago
• single-cell-genetics / singlecell_neuroseq_paper
  Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
  ☆21Updated 11 months ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• tanaylab / embflow
  ☆12Updated 2 years ago
• Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel
  ☆15Updated 2 years ago
• bjstewart1 / kidney_sc_immune
  Repository for scRNAseq study of human kidneys
  ☆15Updated 6 years ago
• wgmao / NIFA
  Non-negative Independent Factor Analysis for single cell RNA-seq
  ☆11Updated 3 years ago
• reedliu / scRNA-codes
  ☆17Updated 5 years ago
• mingjingsi / FIRM
  Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets
  ☆12Updated 2 years ago
• debsin / dropClust
  Version 2.1.0 released
  ☆23Updated 5 years ago
• cole-trapnell-lab / pseudospace
  ☆12Updated 5 years ago
• woojunshim / TRIAGE
  Transcriptional Regulatory Inference Analysis from Gene Expression (TRIAGE)
  ☆9Updated last year
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆13Updated 3 years ago
• ML4BM-Lab / ELATUS
  ☆11Updated 2 months ago
• FertigLab / pycogaps
  python API to the CoGAPS NMF package
  ☆19Updated last month
• scottzijiezhang / MeRIPtools
  ☆8Updated 3 years ago
• ChenWeiyan / LandSCENT
  Landscape Single Cell Entropy
  ☆20Updated 4 years ago
• KChen-lab / SCMarker
  Marker gene selection from scRNA-seq data
  ☆15Updated 4 years ago
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated 8 months ago
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆15Updated 4 years ago
• qingnanl / gsdensity
  ☆9Updated 11 months ago
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆17Updated 4 months ago