mqzhanglab / BSDELinks
A single-cell RNAseq differential expression analysis approach in case-control study
☆10Updated 3 years ago
Alternatives and similar repositories for BSDE
Users that are interested in BSDE are comparing it to the libraries listed below
Sorting:
- The million-scale method for single-cell analysis☆10Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Updated 3 years ago
- python API to the CoGAPS NMF package☆19Updated 4 months ago
- ☆12Updated 4 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆15Updated 6 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆12Updated 3 years ago
- ☆13Updated 6 months ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Updated 3 years ago
- ☆11Updated 2 years ago
- Version 2.1.0 released☆23Updated 6 years ago
- ☆11Updated 5 years ago
- ☆17Updated 2 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 11 months ago
- ☆21Updated this week
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 3 years ago
- ☆12Updated 2 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated 2 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 6 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- R package for generalized binary covariance decomposition.☆10Updated 2 months ago
- ☆18Updated 3 years ago
- ☆16Updated 7 months ago
- ☆10Updated 3 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆20Updated last month
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- Consistent Clusters for scRNA-seq☆10Updated 4 years ago
- Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSC…☆12Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago