ayshwaryas / ddqc_R
☆10Updated 2 years ago
Alternatives and similar repositories for ddqc_R:
Users that are interested in ddqc_R are comparing it to the libraries listed below
- ☆20Updated last year
- ☆45Updated 5 months ago
- ☆29Updated 4 months ago
- scover☆22Updated last year
- Analyzing chromatin accessibility data in R☆18Updated last year
- ☆31Updated 8 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆22Updated 2 years ago
- ☆22Updated 2 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆14Updated 2 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆20Updated 9 months ago
- Transcriptional Regulatory Inference Analysis from Gene Expression (TRIAGE)☆9Updated 11 months ago
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆18Updated last month
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆30Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- Gene Expression Decomposition and Integration☆16Updated 4 months ago
- Analysis pipeline for our circSC manuscript☆12Updated 2 years ago
- Vaeda method for computational doublet annotation☆14Updated 6 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆17Updated last year
- Landscape Single Cell Entropy☆19Updated 4 years ago
- ☆11Updated 5 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆22Updated 2 years ago
- ☆11Updated 3 years ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆18Updated 2 years ago
- ☆29Updated last year
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 5 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆15Updated 10 months ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆12Updated 2 years ago