rdong08 / spatialDWLS_datasetLinks
code and dataset for spatialDWLS
☆13Updated 4 years ago
Alternatives and similar repositories for spatialDWLS_dataset
Users that are interested in spatialDWLS_dataset are comparing it to the libraries listed below
Sorting:
- The code for processing single cell RNA-Seq dataset from ESCC cohorts☆10Updated 4 years ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- ☆12Updated 2 years ago
- ☆23Updated 2 years ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆37Updated 6 months ago
- ☆18Updated 3 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 5 months ago
- Spatial Cellular Estimator for Tumors☆56Updated last week
- Code associated with the manuscript Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in t…☆18Updated 2 years ago
- Codes used in LISTA project.☆11Updated last year
- ☆22Updated 2 years ago
- ☆29Updated 2 weeks ago
- ☆31Updated 2 years ago
- De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data☆18Updated 2 years ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- ☆13Updated 9 months ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆31Updated 6 months ago
- Code to go along with https://doi.org/10.1016/j.cell.2022.09.010☆21Updated 3 years ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- ☆31Updated 5 months ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- The Software of UnionCom Algorithm☆25Updated last year
- ☆29Updated 3 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- ☆18Updated 2 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆40Updated last month
- ☆55Updated last month
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year