YangLabHKUST / PortalLinks
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
☆33Updated 2 years ago
Alternatives and similar repositories for Portal
Users that are interested in Portal are comparing it to the libraries listed below
Sorting:
- ☆60Updated 2 years ago
- Additional code and analysis from the single-cell integration benchmarking project☆67Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆37Updated last year
- Gene group activity utility functions for Scanpy☆90Updated 9 months ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 8 months ago
- ☆46Updated last year
- End-to-end analysis of spatial multi-omics data☆93Updated last month
- Predict RNA velocity through deep learning☆70Updated last year
- ☆31Updated 7 months ago
- The benchmarking of spatial transcriptomics deconvolution methods☆32Updated 2 years ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆103Updated this week
- ☆114Updated 4 months ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆113Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆36Updated 8 months ago
- Code for the spatialLIBD R/Bioconductor package and shiny app☆96Updated last week
- Single cell omics biology annotations☆51Updated 5 months ago
- Reproducing result from the paper☆34Updated 4 years ago
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆65Updated last month
- Spatially resolved transcriptomic analysis☆60Updated 2 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated 11 months ago
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆46Updated 4 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆30Updated 4 years ago
- Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space☆79Updated 3 weeks ago
- TACCO: Transfer of Annotations to Cells and their COmbinations☆59Updated last month
- ☆51Updated 4 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 10 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆64Updated 2 months ago
- Spatial Cellular Estimator for Tumors☆57Updated last month
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆43Updated last month
- Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics☆54Updated 3 months ago