YangLabHKUST / PortalLinks
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
☆32Updated 2 years ago
Alternatives and similar repositories for Portal
Users that are interested in Portal are comparing it to the libraries listed below
Sorting:
- ☆62Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆40Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆71Updated 3 years ago
- ☆47Updated last year
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆74Updated 11 months ago
- Predict RNA velocity through deep learning☆71Updated 2 years ago
- ☆34Updated 9 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆41Updated 11 months ago
- Gene group activity utility functions for Scanpy☆99Updated last year
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆43Updated 3 months ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆116Updated last year
- ☆47Updated 5 months ago
- Reproducing result from the paper☆34Updated 4 years ago
- SPROD: Spatial expression profiling de-noising☆36Updated 2 years ago
- R implementation of GeneTrajectory☆69Updated last year
- Spatial direct messaging detected by bivariate Moran☆32Updated 5 months ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆23Updated 3 years ago
- Spatial Cellular Estimator for Tumors☆60Updated 2 weeks ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 11 months ago
- Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.☆80Updated 8 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆67Updated 6 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆27Updated last year
- The benchmarking of spatial transcriptomics deconvolution methods☆34Updated 2 years ago
- Spatially resolved transcriptomic analysis☆64Updated 3 years ago
- CAST package☆42Updated last year
- ☆52Updated 3 months ago
- End-to-end analysis of spatial multi-omics data☆101Updated 2 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆27Updated last year
- ☆32Updated 10 months ago