YangLabHKUST / PortalLinks
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
☆33Updated 2 years ago
Alternatives and similar repositories for Portal
Users that are interested in Portal are comparing it to the libraries listed below
Sorting:
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 9 months ago
- ☆60Updated 2 years ago
- Predict RNA velocity through deep learning☆70Updated last year
- Gene group activity utility functions for Scanpy☆95Updated 10 months ago
- Additional code and analysis from the single-cell integration benchmarking project☆68Updated 2 years ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆115Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆38Updated last year
- Code for the spatialLIBD R/Bioconductor package and shiny app☆102Updated last week
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆46Updated 4 years ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆40Updated 9 months ago
- Spatial direct messaging detected by bivariate Moran☆31Updated 3 months ago
- ☆45Updated last year
- ☆46Updated last year
- R implementation of GeneTrajectory☆65Updated last year
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- Reproducing result from the paper☆34Updated 4 years ago
- ☆21Updated last year
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆43Updated last month
- ☆44Updated 3 years ago
- ☆31Updated 8 months ago
- End-to-end analysis of spatial multi-omics data☆95Updated last week
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆96Updated 8 months ago
- Spatial Cellular Estimator for Tumors☆58Updated last month
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆107Updated last month
- ☆60Updated last year
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- CAST package☆40Updated last year
- SPROD: Spatial expression profiling de-noising☆37Updated 2 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆31Updated 4 years ago
- ☆50Updated last month