epigen / scifiRNA-seq_publicationLinks
The million-scale method for single-cell analysis
☆10Updated 2 years ago
Alternatives and similar repositories for scifiRNA-seq_publication
Users that are interested in scifiRNA-seq_publication are comparing it to the libraries listed below
Sorting:
- A single-cell RNAseq differential expression analysis approach in case-control study☆9Updated 3 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Updated 3 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- ☆12Updated 4 years ago
- ☆12Updated 2 years ago
- python API to the CoGAPS NMF package☆19Updated 2 months ago
- ☆10Updated 3 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 9 months ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆14Updated 6 years ago
- ☆12Updated 4 years ago
- ☆18Updated 3 years ago
- ☆17Updated 2 years ago
- ☆15Updated 3 years ago
- ☆12Updated last year
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 5 years ago
- ☆18Updated 2 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Updated 10 months ago
- Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSC…☆11Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Algorithms for single-cell analysis☆29Updated 4 years ago
- scripts for analyzing data of macrophage development in human☆10Updated 5 years ago
- ☆16Updated last year
- Automated marker-based annotation of cell types☆13Updated 3 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆23Updated 3 months ago
- ☆12Updated 5 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Updated last year