yangence / DEBKSLinks
a tool to detect differentially expressed circular RNA
☆12Updated last year
Alternatives and similar repositories for DEBKS
Users that are interested in DEBKS are comparing it to the libraries listed below
Sorting:
- direct comparison of circular and linear RNA expression☆22Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆43Updated last year
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- circular RNA quantification tools☆31Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 3 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆16Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- Demultiplexes a fastq.☆46Updated 4 years ago
- Tutorial Website☆59Updated 4 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- ☆25Updated last year
- RNA editing tests☆17Updated 4 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 5 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆61Updated 8 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆52Updated 3 years ago
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆34Updated 9 months ago
- Comprehensive analysis of small RNA sequencing data☆33Updated 3 months ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆18Updated 2 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 3 months ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆51Updated last year
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated this week
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago