yhg926 / TQSLE
TQSLE v1.0 released
☆10Updated last year
Alternatives and similar repositories for TQSLE:
Users that are interested in TQSLE are comparing it to the libraries listed below
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- repository for code used in analysis of open wild wheat consortium☆15Updated 3 years ago
- ☆9Updated 3 years ago
- ☆15Updated 3 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated last month
- ☆14Updated last year
- ☆16Updated 5 years ago
- defusion☆14Updated 3 years ago
- Invertory of TE-gene isoforms☆9Updated last year
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 6 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 2 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆17Updated 3 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated last month
- This is the Haplotypo repository☆20Updated 8 months ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆14Updated 2 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- ☆11Updated 2 years ago
- ☆14Updated 2 years ago
- Yet another Hi-C scaffolding tool☆18Updated 3 months ago
- ☆15Updated 4 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆23Updated 3 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆21Updated 7 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆24Updated 4 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆11Updated 3 years ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆7Updated 11 years ago
- A repo contains historical and updated MTEC libraries.☆17Updated 4 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆12Updated 7 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆20Updated 4 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆18Updated last year