PacificBiosciences / hg002-ccs
☆14Updated 3 years ago
Alternatives and similar repositories for hg002-ccs:
Users that are interested in hg002-ccs are comparing it to the libraries listed below
- ☆13Updated 11 months ago
- Plot CNV data with a genome viewer in R☆15Updated 7 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆12Updated 2 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆28Updated 8 months ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆27Updated 9 months ago
- ☆20Updated 5 months ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 2 weeks ago
- Scripts for analyses and figures for SNP STR Imputation manuscript☆12Updated 6 years ago
- Phase reads, assemble haplotypes and detect SVs☆19Updated 4 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 6 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Updated 2 years ago
- Sample Contamination Estimate from VCF☆19Updated 4 months ago
- Toolkit for calling and analyzing de novo STR mutations☆13Updated last year
- Computes various SV statistics☆14Updated last year
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated last year
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆31Updated last month
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- ☆16Updated 2 months ago
- PopSTR - A Population based microsatellite genotyper☆32Updated last year
- Prioritize structural variants based on CADD scores☆29Updated 4 years ago
- Enabling differential allele-specific analysis☆11Updated 3 months ago
- Structural variant (SV) analysis tools☆36Updated 9 months ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated last month
- Immuological gene typing and annotation for genome assembly☆35Updated 3 weeks ago
- Liftover VCF files☆17Updated 8 years ago
- ☆21Updated 3 weeks ago
- ☆20Updated last year