Hierarchical Random Forest for Information Transfer
☆13May 26, 2021Updated 4 years ago
Alternatives and similar repositories for HieRFIT
Users that are interested in HieRFIT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- cluster stability measurement by subsampling and reclustering with Seurat V3 and V4☆11Jul 9, 2021Updated 4 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Probabilistic gene expression barcodes for cell type annotation☆27Apr 26, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repositorio en el que se desarrollará el código de las prácticas de la asignatura "Fuentes de Datos Biomédicos y Web Semántica", del Grad…☆50Apr 27, 2026Updated last week
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆28Nov 7, 2025Updated 6 months ago
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- ☆14Mar 28, 2025Updated last year
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Dec 20, 2023Updated 2 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- R interface to megadepth: BigWig and BAM related utilities☆14Mar 31, 2026Updated last month
- A clusterability measure for scRNA-seq data.☆19Feb 2, 2022Updated 4 years ago
- Empirical Bayes methods for single cell data☆17Oct 12, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repository to perform mapping of new datasets to the Human Lung Cell Atlas.☆20Jun 7, 2023Updated 2 years ago
- Identifying cell subpopulational differences among single-cell biospecimens☆17Sep 27, 2024Updated last year
- Repo for website and other code for mouse sci-ATAC-seq project☆30Oct 1, 2020Updated 5 years ago
- JEME method for predicting enhancer targets☆11Jul 15, 2017Updated 8 years ago
- epigenome analysis to rank transcription factors☆15Dec 19, 2019Updated 6 years ago
- An implementation from scratch of major Graph Neural Network (GNN) architectures using Numpy☆16Mar 16, 2026Updated last month
- ☆16Feb 17, 2025Updated last year
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated 2 years ago
- ☆25Dec 5, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping☆29Apr 5, 2026Updated last month
- ☆17Jun 1, 2018Updated 7 years ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 4 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆30Sep 9, 2021Updated 4 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Sep 24, 2018Updated 7 years ago
- Mapping-free software for fishing relevant reads in an RNA-Seq sample☆19Dec 9, 2020Updated 5 years ago
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆47Mar 26, 2025Updated last year
- ☆16May 13, 2022Updated 3 years ago
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆11Mar 11, 2024Updated 2 years ago
- Scripts for using scanpy☆39Oct 20, 2025Updated 6 months ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated 3 months ago