lcalviell / Ribo-seQCLinks
A comprehensive analysis tool for Ribo-seq and small RNA-seq data
☆10Updated 5 years ago
Alternatives and similar repositories for Ribo-seQC
Users that are interested in Ribo-seQC are comparing it to the libraries listed below
Sorting:
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated 2 years ago
- ☆14Updated 9 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆19Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Updated 2 years ago
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated last year
- Improved Ribo-seq enables identification of cryptic translation events☆16Updated 7 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- ☆15Updated 3 years ago
- Workflow for Sequenza, cellularity and ploidy☆25Updated 4 months ago
- Transcriptome-wide network☆16Updated 6 years ago
- IDR☆31Updated 2 years ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated last year
- An R package to process and analyze transcriptomic data☆18Updated 6 months ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 6 months ago
- ☆23Updated 4 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- ☆22Updated 3 months ago
- Git repo for CONIPHER tree building☆24Updated 9 months ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 3 months ago
- ☆18Updated 4 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 9 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- ☆31Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year