rargelaguet / scnmt_gastrulation
scNMT-seq gastrulation
☆42Updated 2 years ago
Alternatives and similar repositories for scnmt_gastrulation:
Users that are interested in scnmt_gastrulation are comparing it to the libraries listed below
- ☆39Updated 4 years ago
- Clone identification from single-cell data☆61Updated 2 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆57Updated 2 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆38Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 4 years ago
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- ☆59Updated 7 months ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- ☆37Updated last week
- Population balance analysis☆44Updated 5 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆42Updated 2 years ago
- ☆54Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆73Updated 4 years ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- scWGCNA☆58Updated 2 years ago
- ☆35Updated last month
- ☆33Updated 5 years ago
- ☆28Updated 6 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 8 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 4 years ago
- Clone of the Bioconductor repository for the scran package.☆41Updated 7 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago