quadbio / simspecLinks
Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)
☆35Updated last year
Alternatives and similar repositories for simspec
Users that are interested in simspec are comparing it to the libraries listed below
Sorting:
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 5 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 11 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆50Updated 5 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆37Updated 2 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- Ordering gene-expression and functional events in single-cell experiments☆25Updated last year
- CellRank's reproducibility repository.☆16Updated 3 years ago
- ☆60Updated last year
- iterative clustering pipeline of big single cell datasets.☆34Updated 2 months ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 4 years ago
- Cell-cell communication and lineage inference for scRNA-seq data☆24Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated last week
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 5 months ago
- ☆10Updated 2 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆21Updated 2 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 2 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago
- analysis script for GBM single cell RNA seq data☆22Updated 4 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆85Updated 2 years ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆63Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- SCDC☆45Updated 4 months ago