Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
☆20Aug 9, 2023Updated 3 years ago
Alternatives and similar repositories for RiboseQC
Users that are interested in RiboseQC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆43Feb 14, 2026Updated 6 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆21Dec 20, 2023Updated 2 years ago
- release version☆62Jul 29, 2022Updated 4 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Analysis and Visualization of Ribosome Profiling Data☆32Aug 29, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ORF Quantification pipeline for Alternative Splicing☆16May 11, 2021Updated 5 years ago
- A copy of RiboTaper v1.2☆10Mar 14, 2021Updated 5 years ago
- ☆10Jan 15, 2020Updated 6 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆54Oct 21, 2025Updated 9 months ago
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆64Feb 24, 2025Updated last year
- Scripts and instructions to apply RiboTIE on Ribo-seq data☆20Jul 22, 2025Updated last year
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆12Mar 2, 2023Updated 3 years ago
- Complete analysis pipeline for PAR-CLIP data☆10May 7, 2015Updated 11 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆14Mar 18, 2016Updated 10 years ago
- Detection of differential translated genes using Ribo-seq☆17Apr 10, 2021Updated 5 years ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 2 years ago
- ☆12Sep 8, 2021Updated 4 years ago
- RiboDiff: Tool to detect changes in translational efficiency based on ribosome footprinting data☆24Oct 3, 2016Updated 9 years ago
- do some exercise☆15Dec 2, 2025Updated 8 months ago
- Search the biomedical literature for protein interactions and protein associations☆11Nov 24, 2023Updated 2 years ago
- Genome-wide assessment of differential translations with ribosome profiling data☆23May 6, 2025Updated last year
- Advanced steps of the OSCA book☆14Jul 28, 2026Updated 2 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆11Aug 21, 2024Updated last year
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆12Apr 9, 2021Updated 5 years ago
- ☆15Dec 22, 2025Updated 7 months ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- An R package for automatically aggregating and summarizing lncRNA analysis results.☆16Mar 5, 2019Updated 7 years ago
- Python package to plot sequence logos☆29Sep 21, 2023Updated 2 years ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 7 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated 2 years ago
- SODAR: System for Omics Data Access and Retrieval☆23Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analysis and visualization of RNA-Seq results☆33Updated this week
- 📁 Simple file browser and list selector for Shiny apps☆20Jun 16, 2023Updated 3 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- ☆12Nov 7, 2022Updated 3 years ago
- R package for reading in & working with NucleoATAC outputs☆26Oct 13, 2018Updated 7 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago