yuansliu / minirmdLinks
☆12Updated 2 years ago
Alternatives and similar repositories for minirmd
Users that are interested in minirmd are comparing it to the libraries listed below
Sorting:
- Removing PCR duplicates for sequencing reads.☆14Updated 4 years ago
- The shiny app that accompanies the ngsReports R package☆14Updated 4 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- End-guided RNA assembler☆15Updated last week
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 8 months ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- Analyse RNA feature distributions.☆16Updated 8 months ago
- ☆16Updated last month
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Updated last month
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆16Updated 3 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- A toolkit to design standard primers, multiplexed primers, and primers around SV's☆12Updated 2 years ago
- Nanopore Real-Time Analysis Tool☆15Updated 11 months ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Updated 3 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆13Updated 5 years ago
- CLI to automate Nextflow pipeline testing☆12Updated last week
- ☆20Updated last year
- Program for estimating admixture proportions and doing principal component analysis of a single NGS sample☆10Updated last year
- Human pan-genome analysis pipeline☆30Updated 5 years ago
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- This is the GPress, a framework for querying GTF, GFF3 and expression files in a compressed form.☆12Updated last year
- Whole genome workflows☆12Updated 9 months ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆12Updated 8 months ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated 3 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- ☆16Updated 7 months ago
- Two pass alignment for long reads☆22Updated 4 years ago