☆12Feb 14, 2023Updated 3 years ago
Alternatives and similar repositories for minirmd
Users that are interested in minirmd are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jan 31, 2020Updated 6 years ago
- The new version is available at https://github.com/RabbitBio/RabbitQCPlus☆25Jun 20, 2022Updated 4 years ago
- BACNET is a Java based platform to develop website for multi-omics analysis☆12Feb 16, 2026Updated 8 months ago
- Fast, sensitive and accurate protein remote homology search on GPUs☆15May 6, 2024Updated 2 years ago
- This is the GitHub repository for our benchmarking study "Benchmarking of computational error-correction methods for next-generation sequ…☆12Mar 13, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 6 years ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data☆11Mar 4, 2026Updated 7 months ago
- Using RNA-Seq data to improve microRNA target prediction accuracy in animals☆11Feb 15, 2026Updated 8 months ago
- A k-mer frequency statistics software☆15Nov 19, 2021Updated 4 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- ☆12Sep 4, 2022Updated 4 years ago
- The shiny app that accompanies the ngsReports R package☆14Jun 10, 2021Updated 5 years ago
- Sequence Generation for Differential Expression Analysis and Beyond☆11May 15, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Very large scale k-mer counting and analysis on Apache Spark.☆19Sep 30, 2026Updated last month
- ☆10Apr 17, 2021Updated 5 years ago
- A FASTQ lossless compression algorithm especially designed for nanopore sequencing FASTQ files.☆10Jul 2, 2020Updated 6 years ago
- a novel next-generation sequencing simulator using position and genomic contexts based error profiles☆13Dec 18, 2020Updated 5 years ago
- fastq quality assessment and filtering tool☆17Dec 10, 2022Updated 3 years ago
- RabbitMash: an efficient highly optimized implementation of Mash.☆20Oct 28, 2023Updated 3 years ago
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated 8 months ago
- Find and visualize rearrangements in DNA sequences☆56Jun 3, 2026Updated 5 months ago
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- The UltraPlexer is a kmer-based tool that allows assigning non-barcoded long-read sequences generated by the Oxford Nanopore Technology t…☆10Aug 16, 2021Updated 5 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆20Jul 6, 2026Updated 3 months ago
- ☆16Jul 7, 2025Updated last year
- Find Unique genomic Regions☆34Sep 29, 2026Updated last month
- ☆17May 1, 2025Updated last year
- convert a blast output to a bed file☆12Jun 19, 2015Updated 11 years ago
- Analyzing sketching and sampling approaches for fast and accurate read classification☆10Aug 30, 2022Updated 4 years ago
- Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data☆11Sep 3, 2026Updated 2 months ago
- interactive Multi Objective K-mer Analysis☆25Mar 5, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Human pan-genome analysis pipeline☆30Apr 30, 2020Updated 6 years ago
- Transcript specific RNA splicing events lookup☆10Jun 22, 2026Updated 4 months ago
- Python program, based on Prody, for pathogenicity prediction of human missense variants☆10Jun 29, 2021Updated 5 years ago
- CARE: Context-Aware Read Error correction for Illumina reads☆21Nov 1, 2023Updated 3 years ago
- State-of-the-art ab initio prediction of 1D protein structure annotations☆13Feb 28, 2021Updated 5 years ago
- Network construction Algorithm☆23Sep 5, 2024Updated 2 years ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago