Homepage: https://miaozhun.github.io/DEsingle. Bioconductor page: https://bioconductor.org/packages/DEsingle.
☆33Jan 10, 2023Updated 3 years ago
Alternatives and similar repositories for DEsingle
Users that are interested in DEsingle are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆18Mar 27, 2026Updated 3 weeks ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆20Mar 31, 2026Updated 2 weeks ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆13Apr 7, 2026Updated last week
- Image Mass Cytometry analysis pipeline☆26Jun 3, 2025Updated 10 months ago
- Computational analysis for mass spectrometry-based proteomics data☆11Apr 25, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Sep 5, 2018Updated 7 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.☆14Dec 6, 2021Updated 4 years ago
- Improved Ribo-seq enables identification of cryptic translation events☆17Feb 13, 2018Updated 8 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Jun 22, 2022Updated 3 years ago
- Tools for working with jupyter notebooks☆14Apr 11, 2018Updated 8 years ago
- Efficient data structures and IO for whole slide image analysis☆26Mar 23, 2026Updated 3 weeks ago
- A simple python library to identify the most likely strain from the population☆10Jan 11, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Sep 26, 2019Updated 6 years ago
- Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…☆37Apr 5, 2023Updated 3 years ago
- ☆36Jun 4, 2024Updated last year
- Github repository for nanoSPLITS manuscript data and R scripts☆10Oct 11, 2024Updated last year
- Consensus peaks of chromatin accessibility in the human genome☆17Dec 1, 2025Updated 4 months ago
- bioinformatics R test code☆14Mar 29, 2026Updated 3 weeks ago
- Descriptive probabilistic marker gene approach to single-cell pseudotime inference☆31Nov 29, 2019Updated 6 years ago
- Data files of promoter and non-promoter sequences used to build CNN models☆13Dec 24, 2016Updated 9 years ago
- This repository accompanies our Cell Metabolism manuscript "Plasma protein-based organ-specific aging and mortality models unveil disease…☆11Jan 5, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Clone identification from single-cell data☆63Nov 10, 2022Updated 3 years ago
- A statistical simulator for rational scRNA-seq experimental design☆12Dec 14, 2020Updated 5 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- TopPIC suite is a software suite for proteoform identification by top-down mass spectrometry.☆14Mar 10, 2026Updated last month
- Glimma R package☆50Sep 2, 2024Updated last year
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 2 years ago
- ☆24Feb 26, 2023Updated 3 years ago
- Bootstrap imputation for scRNAseq data☆12Jul 18, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- personal genome constructor☆10May 29, 2025Updated 10 months ago
- WeGene 微解读专业版开发者文档☆28Oct 13, 2025Updated 6 months ago
- Branching Gaussian process☆30May 14, 2023Updated 2 years ago
- ☆22Mar 22, 2023Updated 3 years ago
- RiboPlotR package for Ribo-plot☆16Jun 12, 2025Updated 10 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆16Mar 17, 2023Updated 3 years ago
- Add functional variant annotation to MAF file☆11Nov 20, 2024Updated last year