mohuangx / SAVER-paperLinks
Scripts for data and figure generation in SAVER paper
☆17Updated 4 years ago
Alternatives and similar repositories for SAVER-paper
Users that are interested in SAVER-paper are comparing it to the libraries listed below
Sorting:
- benchmark for single-cell RNA-seq imputation methods☆26Updated last year
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 10 months ago
- ☆11Updated 5 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆21Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ☆37Updated last month
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆14Updated 6 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆53Updated 2 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- ☆16Updated 6 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated last year
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- Version 2.1.0 released☆23Updated 5 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆30Updated 4 years ago
- ☆29Updated 2 years ago
- ☆28Updated 6 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆15Updated 4 years ago