ChristophH / in-lineageLinks
Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"
☆24Updated 7 years ago
Alternatives and similar repositories for in-lineage
Users that are interested in in-lineage are comparing it to the libraries listed below
Sorting:
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 5 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- Analysis pipeline for the adolescent mouse nervous system project☆24Updated 7 years ago
- ☆48Updated 7 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago
- ☆43Updated 4 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- single nuclei RNA-seq analysis toolbox☆10Updated 9 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated 2 years ago
- ☆28Updated 6 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆46Updated 9 years ago
- ☆55Updated 5 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Single-cell Case Control Analysis☆52Updated last week
- post-clustering differential expression test☆36Updated 6 years ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 4 years ago
- Clone identification from single-cell data☆61Updated 3 years ago
- ☆29Updated 2 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Updated last year
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Selecting the optimal trajectory inference based on a given dataset and user input 🔮☆19Updated 5 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- ☆30Updated 3 years ago