Bioconductor / GenomicFeatures
Query the gene models of a given organism/assembly
☆27Updated 3 weeks ago
Alternatives and similar repositories for GenomicFeatures:
Users that are interested in GenomicFeatures are comparing it to the libraries listed below
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- R package wrapping bedtools☆40Updated last month
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 2 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated 4 months ago
- An R for fast and flexible DNA methylation analysis☆32Updated 9 months ago
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 3 weeks ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- ☆28Updated 9 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- a set of NGS pipelines☆24Updated last week
- workshop website on readthedocs☆19Updated 2 weeks ago
- R package for testing and visualizing gene list overlaps☆18Updated 8 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 years ago
- DriverPower☆26Updated 3 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆15Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 9 months ago
- Documentation for vcfR☆11Updated 2 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated last month
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago
- Utility functions for FACETS☆35Updated last year
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- Merge fastq files split over lanes☆20Updated 7 years ago
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- Representation and manipulation of genomic intervals☆45Updated 3 weeks ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- CNV analysis workflow code for the manuscript☆13Updated 4 years ago