Alternatives and similar repositories for Glimma:

Users that are interested in Glimma are comparing it to the libraries listed below

• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆22Updated 5 years ago
• hansenlab / minfi
  Devel repository for minfi
  ☆60Updated 10 months ago
• stephaniehicks / qsmooth
  Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…
  ☆50Updated 2 years ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆44Updated 3 months ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated last month
• sa-lee / superintronic
  A tidy interface for coverage analysis
  ☆24Updated 5 years ago
• mikelove / deseq2_or_edger
  DESeq2 or edgeR
  ☆22Updated 8 years ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆37Updated 3 months ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 2 months ago
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆37Updated 2 years ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated last month
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆43Updated 3 months ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆36Updated 2 months ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆75Updated 4 years ago
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆28Updated 2 months ago
• nignatiadis / IHW
  Independent Hypothesis Weighting
  ☆15Updated last year
• drisso / peixoto2015_tutorial
  Tutorial to reproduce the analysis of Peixoto et al. (2015)
  ☆9Updated 9 years ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated last year
• jtleek / sva-devel
  ☆28Updated 7 months ago
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆44Updated 4 years ago
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆31Updated 7 months ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆39Updated last year
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆86Updated this week
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆38Updated last week
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆19Updated last year
• JEFworks / liger
  Lightweight Iterative Gene set Enrichment in R
  ☆57Updated 5 months ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆59Updated 3 months ago
• btmonier / vidger
  Make rapid visualizations of RNA-seq data in R
  ☆19Updated 5 years ago