☆24Feb 26, 2023Updated 3 years ago
Alternatives and similar repositories for LFQbench
Users that are interested in LFQbench are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Oct 12, 2021Updated 4 years ago
- ProXL Web App -- Visualize and Share Protein Cross-linking Data☆13Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆29May 20, 2025Updated last year
- Computational analysis for mass spectrometry-based proteomics data☆11Apr 25, 2016Updated 10 years ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆126Apr 19, 2026Updated last month
- Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.☆18Sep 7, 2023Updated 2 years ago
- De novo peptide sequencing for DDA and DIA by deep learning☆40Nov 26, 2020Updated 5 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆83Mar 26, 2026Updated last month
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 3 months ago
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Apr 24, 2026Updated last month
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.☆53Nov 18, 2021Updated 4 years ago
- The codebase of the OpenMS project☆593May 17, 2026Updated last week
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆95Mar 18, 2026Updated 2 months ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆12Feb 8, 2021Updated 5 years ago
- mist R package files☆10May 5, 2025Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Mar 21, 2026Updated 2 months ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆26Apr 22, 2026Updated last month
- Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics☆18Oct 11, 2018Updated 7 years ago
- Deep learning framework for proteomics☆152Apr 21, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆18Aug 9, 2019Updated 6 years ago
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 5 months ago
- ☆38Updated this week
- The repo for LFQ-Analyst☆30Aug 7, 2024Updated last year
- A library for deisotoping and charge state deconvolution of complex mass spectra☆41Jul 30, 2025Updated 9 months ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆31Apr 16, 2026Updated last month
- Some shell scripts related to Thermo Fisher raw format conversion using msconvert☆15Feb 10, 2026Updated 3 months ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Apr 22, 2026Updated last month
- ☆22Jun 28, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- web based visualisation of CLMS data☆13Nov 22, 2022Updated 3 years ago
- Proteogenomics database-generation tool for protein haplotypes and variants☆11Jun 19, 2025Updated 11 months ago
- ☆12May 4, 2026Updated 2 weeks ago
- Analysis of co-fractionation MS datasets☆13Dec 7, 2021Updated 4 years ago
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆155May 11, 2026Updated last week
- PyProphet: Semi-supervised learning and scoring of OpenSWATH results.☆31May 8, 2026Updated 2 weeks ago
- Computational analysis for mass spectrometry-based proteomics data☆20Feb 22, 2026Updated 3 months ago