IFIproteomics / LFQbench
☆24Updated 2 years ago
Alternatives and similar repositories for LFQbench:
Users that are interested in LFQbench are comparing it to the libraries listed below
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆42Updated this week
- R package - MSstats☆81Updated this week
- Differential Expression Analysis tool box R lang package for omics data☆44Updated 3 weeks ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated last month
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- The repo for LFQ-Analyst☆30Updated 8 months ago
- ☆58Updated 11 months ago
- ☆13Updated last year
- PDV: an integrative proteomics data viewer☆46Updated last week
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 3 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆30Updated last month
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Updated 2 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆22Updated last week
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆10Updated 9 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆52Updated 3 years ago
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆43Updated 3 months ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆24Updated 4 months ago
- Quantitative proteomics workflow☆15Updated 2 years ago
- pathway and network analysis for metabolomics☆40Updated 10 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- Rescoring and spectral library generation pipeline for proteomics.☆42Updated this week
- Report processing and protein quantification for MS-based proteomics☆42Updated last year
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆36Updated last month
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- ☆17Updated last week
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 4 months ago
- MS/MS prediction for peptides☆22Updated 4 years ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆23Updated 6 months ago
- A Python interface to proteomics data repositories☆34Updated last month