Alternatives and similar repositories for BiocExplorer

Users that are interested in BiocExplorer are comparing it to the libraries listed below

• seandavi / BiocPkgTools
  Computable build reports, package metadata, and download stats from the Bioconductor project
  ☆21Updated last week
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆21Updated last month
• PeteHaitch / DelayedMatrixStats
  A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package
  ☆15Updated 6 months ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 5 years ago
• Bioconductor / bioc-run
  Helper script for bioconductor/bioconductor_docker
  ☆13Updated 7 months ago
• pachterlab / bears_analyses
  Examples of kallisto + sleuth
  ☆11Updated 8 years ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 4 years ago
• lianos / multiGSEA
  NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …
  ☆21Updated 4 years ago
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆17Updated this week
• seandavi / BiocActions
  Develop and host GitHub actions for Bioconductor
  ☆11Updated 4 years ago
• StatGenPRD / STOPGAP
  Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…
  ☆11Updated 5 years ago
• PavlidisLab / neuroexpresso
  Gene expression in neuroexpresso database
  ☆18Updated last year
• Bioconductor / BioC2020
  BioC2020: Where Software and Biology Connect
  ☆12Updated 2 years ago
• pachterlab / lair
  home of the bear's lair
  ☆10Updated 8 years ago
• GuangchuangYu / ideogram
  ☆13Updated 6 years ago
• alpreyes / GENAVi
  ☆16Updated 5 years ago
• gabrielodom / pathwayPCA
  integrative pathway analysis with modern PCA methodology and gene selection
  ☆11Updated 2 years ago
• stephenturner / hcop
  HGNC Comparison of Orthology Predictions (HCOP)
  ☆14Updated 7 years ago
• facilebio / FacileAnalysis
  Modular & interactive analysis components for bioinformatics
  ☆18Updated 2 weeks ago
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆21Updated 4 months ago
• Bioconductor / BiocStyle
  Issues and pull requests for BiocStyle should go here.
  ☆14Updated 2 months ago
• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated 5 months ago
• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆23Updated 11 months ago
• mtmorgan / TENxGenomics
  Interface to 10x Genomics' 1.3 m single cell data set
  ☆18Updated 7 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆31Updated 5 months ago
• LTLA / TileDBArray
  Clone of the Bioconductor repository for the TileDBArray package.
  ☆11Updated 4 months ago
• stephenslab / poisson.mash.alpha
  An R package for Poisson multivariate adaptive shrinkage.
  ☆11Updated last year
• freestatman / ideogRam
  R htmlwidget package for ideogram.js
  ☆15Updated 3 years ago
• timothy-barry / ondisc
  Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.
  ☆11Updated last year
• opentargets-archive / genetics-app
  Open Targets Genetics UI
  ☆15Updated 9 months ago