Alternatives and similar repositories for BiocExplorer:

Users that are interested in BiocExplorer are comparing it to the libraries listed below

• seandavi / BiocPkgTools
  Computable build reports, package metadata, and download stats from the Bioconductor project
  ☆21Updated this week
• Bioconductor / bioc-run
  Helper script for bioconductor/bioconductor_docker
  ☆11Updated 3 weeks ago
• PeteHaitch / DelayedMatrixStats
  A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package
  ☆16Updated this week
• seandavi / BiocActions
  Develop and host GitHub actions for Bioconductor
  ☆11Updated 3 years ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• pachterlab / bears_analyses
  Examples of kallisto + sleuth
  ☆11Updated 7 years ago
• Bioconductor / BioC2020
  BioC2020: Where Software and Biology Connect
  ☆12Updated 2 years ago
• lianos / multiGSEA
  NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …
  ☆21Updated 4 years ago
• stephenturner / hcop
  HGNC Comparison of Orthology Predictions (HCOP)
  ☆14Updated 7 years ago
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆20Updated last month
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆17Updated 2 months ago
• malhamdoosh / EGSEA
  This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
  ☆10Updated last year
• gabrielodom / pathwayPCA
  integrative pathway analysis with modern PCA methodology and gene selection
  ☆11Updated last year
• pachterlab / lair
  home of the bear's lair
  ☆10Updated 7 years ago
• HenrikBengtsson / git-bioc
  LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync
  ☆10Updated 8 years ago
• caleblareau / immune_cell_signature_genes
  Repository for signature genes from Immune Cell Atlas
  ☆18Updated 5 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated last month
• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆22Updated 4 months ago
• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated 5 months ago
• StatGenPRD / STOPGAP
  Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…
  ☆11Updated 4 years ago
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 4 months ago
• tidyomics / tidyomicsBlog
  the manifesto, workshops and tutorials of the tidy transcriptomics
  ☆13Updated last week
• mtmorgan / TENxGenomics
  Interface to 10x Genomics' 1.3 m single cell data set
  ☆18Updated 6 years ago
• LTLA / TileDBArray
  Clone of the Bioconductor repository for the TileDBArray package.
  ☆10Updated 6 months ago
• Bioconductor / bioc_git_transition
  This python package is for transitioning bioconductor from SVN to git
  ☆14Updated 2 years ago
• GuangchuangYu / ideogram
  ☆13Updated 6 years ago
• freestatman / ideogRam
  R htmlwidget package for ideogram.js
  ☆16Updated 2 years ago
• Kayla-Morrell / CreateAPackage
  The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…
  ☆11Updated 4 years ago
• seandavi / MachineLearningIntro
  Machine learning use cases for teaching
  ☆13Updated 7 years ago
• Bioconductor / TENxBrainAnalysis
  R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics
  ☆12Updated 2 years ago