mckellardw / STRSLinks
Suite of analysis tools for spatial total RNA-sequencing
☆12Updated 2 years ago
Alternatives and similar repositories for STRS
Users that are interested in STRS are comparing it to the libraries listed below
Sorting:
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆17Updated last year
- ☆18Updated 2 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 5 years ago
- ☆12Updated 2 years ago
- A toolkit for analyzing architectural stripes☆20Updated last year
- Scripts used for the ACT paper☆12Updated 4 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Updated last year
- ☆20Updated 2 years ago
- https://molecular-neurogenetics.github.io/truster/☆11Updated 4 months ago
- ☆12Updated 4 years ago
- ☆26Updated 2 years ago
- python API to the CoGAPS NMF package☆19Updated 6 months ago
- ☆14Updated 6 months ago
- A pipeline for Smooth-seq data analysis.☆10Updated 4 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated 2 years ago
- glbase is a flexible and multifunctional toolkit allowing the user to perform many common analyses on ChIP-seq, microarray and RNA-seq da…☆12Updated last month
- ☆11Updated 4 months ago
- ☆18Updated 5 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 3 years ago
- ☆16Updated last month
- ☆25Updated 3 years ago
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆14Updated last year
- ☆10Updated 3 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated 2 months ago
- A collection of perl scripts for NGS analysis☆16Updated last year
- ☆12Updated 4 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Pipeline for designing custom probes against human genes☆20Updated last year
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆16Updated 4 months ago