lsteuernagel / hypoMap_paperLinks
A public clone of the HypoMap Figure & analysis repository.
☆10Updated 2 years ago
Alternatives and similar repositories for hypoMap_paper
Users that are interested in hypoMap_paper are comparing it to the libraries listed below
Sorting:
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆32Updated last year
- ☆21Updated 7 months ago
- ☆56Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 7 months ago
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆19Updated last year
- iterative clustering pipeline of big single cell datasets.☆33Updated 2 months ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 4 years ago
- ☆29Updated 2 months ago
- ☆13Updated 8 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 8 months ago
- CellRank's reproducibility repository.☆15Updated 3 years ago
- Reproducibility repository for the Human Neural Organoid Atlas publication☆38Updated 7 months ago
- ☆22Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆46Updated 4 months ago
- ☆22Updated 2 years ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Updated 9 months ago
- ☆9Updated last year
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆23Updated 3 months ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- ☆15Updated last year
- UHCA☆11Updated 6 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆17Updated 10 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 2 years ago
- Code used to process the data of the HBCA project☆30Updated last year
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago