A public clone of the HypoMap Figure & analysis repository.
☆11Sep 26, 2022Updated 3 years ago
Alternatives and similar repositories for hypoMap_paper
Users that are interested in hypoMap_paper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Dec 23, 2024Updated last year
- ☆23Mar 29, 2023Updated 3 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 4 years ago
- HCA data analysis☆19Mar 30, 2021Updated 5 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Jan 14, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Suite of analysis tools for spatial total RNA-sequencing☆12Aug 10, 2023Updated 2 years ago
- ☆19Sep 29, 2021Updated 4 years ago
- Example scripts for analyzing CUT&RUN datasets☆13Oct 3, 2018Updated 7 years ago
- CellRank's reproducibility repository.☆16Jan 13, 2022Updated 4 years ago
- Killer tools/packages/libraries/websits/...☆21Apr 8, 2026Updated last week
- Code required to reproduce analysis of the single cell Cut and Tag data in the resource paper (Bartosovic et. al., 2020)☆14Apr 2, 2026Updated last week
- ☆19Feb 23, 2022Updated 4 years ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆34Apr 11, 2025Updated last year
- Codebase for the paper Zucha et al. titled "Spatiotemporal transcriptomic map of glial cell response in mouse model of acute brain ischem…☆13Oct 23, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆72May 28, 2025Updated 10 months ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆26Feb 2, 2026Updated 2 months ago
- Pipeline for SpatialTranscriptomics and 10X Visium data☆22Jul 22, 2025Updated 8 months ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- scITDG is a tool for identifying time-dependent genes in single-cell sequencing data☆14Nov 24, 2025Updated 4 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Sep 5, 2022Updated 3 years ago
- Perform differential expression analysis on multi-sample single cell datasets using linear mixed models☆31Feb 2, 2026Updated 2 months ago
- Code for the analyses in the human reference interactome paper.☆28Dec 8, 2022Updated 3 years ago
- Human cortical cell types☆25Aug 21, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21May 19, 2025Updated 10 months ago
- ☆10Jun 5, 2021Updated 4 years ago
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 2 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆45Sep 20, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data☆27Jul 26, 2023Updated 2 years ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- ☆17Nov 5, 2024Updated last year
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Reproducibility repository for the Human Neural Organoid Atlas publication☆45Dec 16, 2024Updated last year
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 3 years ago
- Cytograph version used for adult human-brain analysis☆97Jan 13, 2026Updated 3 months ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Jun 11, 2021Updated 4 years ago
- sougou医学词库爬取☆13Nov 21, 2019Updated 6 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated last year