marcovito / sma
☆13Updated last year
Alternatives and similar repositories for sma:
Users that are interested in sma are comparing it to the libraries listed below
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆20Updated 10 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆29Updated 2 months ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆10Updated 3 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆18Updated 5 months ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆27Updated last week
- Code related to scRNA analysis using the scAmpi workflow☆24Updated 2 months ago
- Difference in Intercellular Communication from scRNA-seq data☆21Updated last year
- ☆20Updated last year
- SuperCell for Cytometry data☆12Updated 9 months ago
- A gene expression signature scoring Python package.☆11Updated last month
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Updated 4 months ago
- ZornLab / Single-cell-transcriptomics-reveals-a-signaling-roadmap-coordinating-endoderm-and-mesoderm-lineageCode and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆9Updated 4 years ago
- ☆12Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- TRUST4 manuscript evaluation☆14Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 10 months ago
- Analyzing chromatin accessibility data in R☆18Updated last year
- Information-based dimensionality reduction☆29Updated last month
- RNA velocity validation☆23Updated 2 years ago
- Landscape Single Cell Entropy☆19Updated 4 years ago
- iterative clustering pipeline of big single cell datasets.☆27Updated 3 weeks ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Automated cell filtering for single-cell RNA sequencing data☆24Updated last year
- GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens☆15Updated 2 years ago
- Code, data and analysis for moslin.☆12Updated 3 months ago
- Pipeline for designing custom probes against human genes☆14Updated 2 months ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆12Updated 4 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- Vaeda method for computational doublet annotation☆15Updated 6 months ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated 5 months ago