Zhiliang-Bai / Patho-DBiTLinks
Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.
☆13Updated last year
Alternatives and similar repositories for Patho-DBiT
Users that are interested in Patho-DBiT are comparing it to the libraries listed below
Sorting:
- ☆48Updated 3 years ago
- ☆17Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 4 months ago
- Accurate and fast cell marker gene identification with COSG☆53Updated last week
- Functions for single cell data analysis☆32Updated 4 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆112Updated 8 months ago
- ☆32Updated last year
- ☆55Updated last year
- ☆32Updated 3 years ago
- Analysis for BICCN cross-species primary motor cortex project☆23Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Updated 3 years ago
- Codes used in pan-T cell analysis☆64Updated 2 years ago
- ☆54Updated last year
- Inferring CNV data from single cell ATAC seq☆25Updated 6 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆53Updated 4 years ago
- Construct Tumor Transition Zone Microenvironment☆49Updated 6 months ago
- Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments☆22Updated 7 months ago
- Functional Inference of Gene Regulation☆49Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆80Updated last year
- detecting spatial patterns of allele-specific expression☆10Updated last year
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆130Updated last year
- ☆31Updated 2 years ago
- ☆59Updated last year
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆76Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆78Updated 5 months ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- Integration of gut cell atlases☆31Updated 2 months ago