rnabioco / scrapsLinks
Single-cell RNA Processing Software
☆11Updated 5 months ago
Alternatives and similar repositories for scraps
Users that are interested in scraps are comparing it to the libraries listed below
Sorting:
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- Bead-based single-cell atac processing☆33Updated 4 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- scover☆24Updated 2 years ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- An R package designed to demultiplex cell hashing data☆31Updated 3 weeks ago
- ☆16Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- ☆29Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 4 months ago
- Network construction Algorithm☆22Updated last year
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnr…☆15Updated 3 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 3 years ago
- ☆23Updated last year
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated 7 months ago
- sharing interactive single cell gene expression visualizations from Seurat☆11Updated 2 years ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- ☆20Updated 4 months ago