lueckenlab / single-cell-papers-trendsLinks
Trends in single cell papers
☆14Updated 8 months ago
Alternatives and similar repositories for single-cell-papers-trends
Users that are interested in single-cell-papers-trends are comparing it to the libraries listed below
Sorting:
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆17Updated 11 months ago
- ☆9Updated 11 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 7 months ago
- cell type specific, trait-associated gene regulation☆27Updated 2 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆21Updated 3 weeks ago
- ☆18Updated last month
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆14Updated last year
- Cell-type Relationship Analysis Workflow Done Across Distances☆31Updated 3 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆11Updated 8 months ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆14Updated 6 months ago
- Publically accessible code for DIISCO method☆10Updated 7 months ago
- Computational pipeline to process EasySci-RNA data.☆20Updated last year
- Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney☆18Updated last year
- iterative clustering pipeline of big single cell datasets.☆32Updated last month
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆18Updated 8 months ago
- ☆13Updated 2 months ago
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆23Updated last week
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 3 months ago
- Python playground for cell-type-specific biology☆10Updated this week
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated 3 months ago
- ☆16Updated 4 years ago
- ☆10Updated 2 years ago
- ☆15Updated 3 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆13Updated 7 months ago
- ☆19Updated 2 weeks ago
- R and MATLAB scripts for MAGICAL☆11Updated 11 months ago
- Data analysis for the moscot-framework project☆12Updated 5 months ago