☆12Mar 22, 2023Updated 3 years ago
Alternatives and similar repositories for SODB_analysis
Users that are interested in SODB_analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆29Jan 4, 2024Updated 2 years ago
- ☆16Jan 6, 2024Updated 2 years ago
- Single Cell RNA PolyA Site Discovery☆11Jan 28, 2026Updated 2 months ago
- ☆10Nov 29, 2022Updated 3 years ago
- ☆15Sep 13, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆13Feb 15, 2024Updated 2 years ago
- Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)☆12Mar 7, 2024Updated 2 years ago
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated last year
- ☆21Dec 23, 2024Updated last year
- Cell2location paper - Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics☆15Nov 26, 2022Updated 3 years ago
- ☆71Jan 18, 2023Updated 3 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆27Jan 23, 2024Updated 2 years ago
- ☆13Sep 29, 2023Updated 2 years ago
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆13Dec 27, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- R client for the bioRxiv API (https://api.biorxiv.org/)☆15May 18, 2021Updated 4 years ago
- Benchmarking clustering, alignment, and integration methods for spatial transcriptomics☆24Dec 19, 2024Updated last year
- ☆13Jan 24, 2024Updated 2 years ago
- A collection of tumour microenvironment single-cell RNA sequencing datasets for use in R and other pipelines.☆20Jul 28, 2025Updated 8 months ago
- ☆12Nov 20, 2023Updated 2 years ago
- ☆19Dec 15, 2023Updated 2 years ago
- This is a read-only mirror of the CRAN R package repository. randomForestSRC — Fast Unified Random Forests for Survival, Regression, an…☆10Feb 12, 2026Updated last month
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Statistical analysis for spatial omics data☆11Jul 30, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆13Apr 27, 2022Updated 3 years ago
- ☆19Mar 8, 2023Updated 3 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Aug 10, 2023Updated 2 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition☆20Sep 12, 2023Updated 2 years ago
- public production version of sequin to share with the public☆11Jan 6, 2025Updated last year
- ☆18Jul 22, 2025Updated 8 months ago
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 3 years ago
- ☆17Mar 18, 2025Updated last year
- R package for metabolic enzyme enrichment anaylsis☆13Oct 24, 2025Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Piranha is a peak-caller for CLIP- and RIP-seq data☆20Feb 7, 2018Updated 8 years ago
- ☆40Jul 14, 2023Updated 2 years ago
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Nov 24, 2022Updated 3 years ago
- ALD study data analysis☆13Feb 16, 2023Updated 3 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21May 19, 2025Updated 10 months ago
- ☆15Aug 17, 2023Updated 2 years ago
- Gene group activity utility functions for Scanpy☆100Dec 21, 2024Updated last year