Alternatives and similar repositories for SODB_analysis

Users that are interested in SODB_analysis are comparing it to the libraries listed below

• TencentAILabHealthcare / pysodb
  ☆24Updated last year
• kaizhang / single-cell-benchmark
  ☆10Updated 2 years ago
• doraadong / UNIFAN
  Unsupervised cell functional annotation for single-cell RNA-Seq
  ☆22Updated 2 years ago
• lanagarmire / Single-cell-drug-repositioning
  ☆16Updated last year
• zhouzilu / cTPnet
  cTPnet Package
  ☆25Updated 3 years ago
• datapplab / AutoClass
  ☆44Updated 3 years ago
• CostaLab / scMEGA
  scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference
  ☆40Updated last year
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 6 months ago
• wanglabtongji / STRIDE
  STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …
  ☆26Updated last year
• marcovito / sma
  ☆15Updated 2 years ago
• shmohammadi86 / SCINET
  ☆18Updated 4 years ago
• Roy-lab / scMTNI
  ☆30Updated 2 months ago
• QuKunLab / MultiomeBenchmarking
  ☆49Updated 7 months ago
• DongqingSun96 / STRIDE
  STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …
  ☆17Updated 3 years ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆43Updated last month
• pqiu / cooccurrence_clustering
  ☆14Updated 5 years ago
• karthikj89 / humanpdac
  single cell analysis of treatment naive and treated human PDAC
  ☆24Updated 3 years ago
• Center-for-Health-Data-Science / multiDGD
  ☆26Updated 4 months ago
• jiang-q19 / scPRAM
  scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism
  ☆15Updated 11 months ago
• dyxmvp / Spatial_ATAC-seq
  ☆23Updated 2 years ago
• rs239 / velorama
  Gene regulatory network inference for RNA velocity and pseudotime data
  ☆27Updated 3 weeks ago
• tanlabcode / CytoTalk
  A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…
  ☆43Updated last month
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆29Updated 2 years ago
• theislab / scTab
  ☆61Updated last year
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆38Updated 4 years ago
• soumelis-lab / ICELLNET
  ☆20Updated 2 months ago
• SchubertLab / mvTCR
  ☆54Updated 11 months ago
• MarioniLab / StabMap
  Mosaic single cell data integration using non-overlapping features
  ☆37Updated 3 years ago
• LiHongCSBLab / SOAPy
  ☆31Updated 7 months ago