Alternatives and similar repositories for RNAdiffAPP

Users that are interested in RNAdiffAPP are comparing it to the libraries listed below

• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 6 months ago
• ShawnWx2019 / MetMiner
  MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis
  ☆17Updated last year
• junjunlab / BioSeqUtils
  Extract Sequence from Genome According to Annotation File
  ☆38Updated 7 months ago
• YutingPKU / AnalysisPipeline-NGS
  ☆12Updated 4 years ago
• YuLab-SMU / MicrobiomeProfiler
  A shiny package for microbiome functional enrichment analysis
  ☆38Updated last week
• GRONINGEN-MICROBIOME-CENTRE / DMP
  Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…
  ☆34Updated 4 years ago
• rnakato / DROMPAplus
  ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.
  ☆24Updated 2 months ago
• YaoLab-Bioinfo / shinyCircos-V2.0
  an R/Shiny application for interactive creation of Circos plot
  ☆50Updated 2 years ago
• yukaiquan / biotools
  I often use some of the self-written programs.
  ☆16Updated last month
• lixiang117423 / qPCRtools
  ☆18Updated 2 years ago
• frankgenome / DataColor
  DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping
  ☆16Updated 2 years ago
• dxsbiocc / ggideogram
  ggideogram is a ggplot2 extension package for drawing chromosome diagrams
  ☆16Updated last year
• ZhangRenL / geneHapR
  ☆18Updated last year
• MengjunWu / TCseq
  An R package for time course sequencing data analysis
  ☆20Updated 2 years ago
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆27Updated 2 years ago
• wangshun1121 / ASCPsra
  将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。
  ☆10Updated 5 years ago
• Searchlight2 / Searchlight2
  Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.
  ☆30Updated last year
• a-velt / Mfuzz_RNAseq
  A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
  ☆23Updated 6 years ago
• ndu-bioinfo / Dap-Seq-pipeline
  TF-DNA-binding assay analysis pipeline
  ☆12Updated 5 years ago
• NYU-BFX / lncRNA-screen
  lncRNA-screen
  ☆25Updated 8 years ago
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆74Updated 7 months ago
• mhalushka / miRge3.0
  Comprehensive analysis of small RNA sequencing data
  ☆34Updated 7 months ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 8 months ago
• junjunlab / GetTransTool
  Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.
  ☆20Updated 3 years ago
• PengYuMaize / Yu2021NaturePlants
  Scripts for WGCNA network analysis and correlation with microbial taxonomy traits
  ☆19Updated 4 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 6 years ago
• hanlinqian / IntegrativeNetworkMap
  ☆23Updated 3 years ago
• yuanlizhanshi / NGS_Workflow
  Some NGS workflow created by snakemake
  ☆14Updated 10 months ago
• xia-lab / Seq2Fun
  ☆17Updated 5 months ago
• alexchwong / SpliceWiz
  SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.
  ☆21Updated 9 months ago