☆17Jan 13, 2024Updated 2 years ago
Alternatives and similar repositories for RNAdiffAPP
Users that are interested in RNAdiffAPP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- ☆15Jan 19, 2022Updated 4 years ago
- Nextflow pipeline for scaffolding genome assemblies with Hi-C reads☆16Nov 5, 2025Updated 9 months ago
- ☆26Dec 15, 2025Updated 7 months ago
- This is a read-only mirror of the CRAN R package repository. TOmicsVis — Transcriptome Visualization Process Scheme. Homepage: https://…☆16Aug 28, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated 10 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- ☆29Jan 16, 2024Updated 2 years ago
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated last year
- ☆16Jul 25, 2021Updated 5 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆11Jun 26, 2026Updated last month
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- ☆27Jun 5, 2025Updated last year
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Single sample pathway analysis tools for omics data☆15Nov 9, 2024Updated last year
- Dynamic Elongation of a Genome Assembly Path☆28Jul 27, 2026Updated 2 weeks ago
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- ☆13Nov 13, 2023Updated 2 years ago
- ☆26Jun 27, 2026Updated last month
- I often use some of the self-written programs.☆16Jun 12, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆19Jul 12, 2026Updated 3 weeks ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- Calculate the dn/ds (also pn and ps) value of cds☆14Jul 11, 2020Updated 6 years ago
- A genome assembly assessment pipeline.☆39Jun 5, 2026Updated 2 months ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 5 months ago
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆18Jul 17, 2026Updated 3 weeks ago
- Structure variants calling and genotyping scripts for pan-Zea☆23Nov 17, 2022Updated 3 years ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆15Aug 27, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆11Feb 22, 2024Updated 2 years ago
- ☆24Feb 26, 2026Updated 5 months ago
- Taxon-aware analysis of clustered protein sequences☆31Jul 1, 2024Updated 2 years ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆22Mar 25, 2022Updated 4 years ago
- Function Enrichment analysis and Network construction☆16Apr 25, 2026Updated 3 months ago
- A tool for motif annotation and visualization in tandem repeats.☆15May 26, 2025Updated last year
- ☆30Oct 20, 2023Updated 2 years ago