lkiko / famCircleLinks
☆14Updated last month
Alternatives and similar repositories for famCircle
Users that are interested in famCircle are comparing it to the libraries listed below
Sorting:
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆14Updated last week
- ☆16Updated 2 years ago
- Some components that speed up and reduce resource cost for original ALLHiC☆14Updated 3 months ago
- ☆15Updated 3 years ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Simple tools for working with Hi-C data☆18Updated 6 years ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Updated last year
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated last month
- A pipeline for genomic variant detection with genome assemblies at population scale☆28Updated 3 months ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆14Updated last year
- SINE annotation tool for plant genomes☆18Updated last year
- Identification of conserved non-coding sequences in plants☆25Updated last week
- Inferring natural selection by comparative population genomic analysis across species☆25Updated last year
- ☆24Updated last year
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Updated last year
- Convert Tandem Repeat Finder dat file output into gff3 format☆28Updated 9 months ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated 10 months ago
- ☆27Updated 5 months ago
- plot genome alignment synteny☆21Updated 5 years ago
- ☆28Updated 3 years ago
- Annotate Olfactory receptor CDS from genome☆10Updated 2 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆15Updated last year
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆14Updated last year
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Updated 5 months ago
- parallelLastz: Running Lastz in parallel☆16Updated last year
- a fork of the gap-closing pipeline PBJelly☆15Updated 6 years ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆17Updated 7 months ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 5 years ago
- Construct and Analyze the North American Vitis pangenome☆24Updated last month
- Tools for haplotype-wise reconstruction of pseudomolecules☆21Updated 3 weeks ago