CMB-BNU / PloidyFrostLinks
reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
☆17Updated last year
Alternatives and similar repositories for PloidyFrost
Users that are interested in PloidyFrost are comparing it to the libraries listed below
Sorting:
- Robust identification of orthologous Synteny with the Orthology Index☆23Updated this week
- ☆24Updated last year
- A genome assembly assessment pipeline.☆37Updated last year
- ☆21Updated 11 months ago
- ☆40Updated 2 years ago
- ☆28Updated last year
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- ☆27Updated 3 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆36Updated 5 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 5 months ago
- MCMCtree tutorials☆25Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆27Updated 3 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- ☆12Updated 2 years ago
- R package to draw syntenic plots in 3 different styles☆41Updated last year
- ☆16Updated 6 months ago
- Genome alignment and synteny plots☆30Updated 2 years ago
- Multi-genome synteny block visualization tool☆42Updated 5 months ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- ☆30Updated 6 months ago
- ☆30Updated 3 months ago
- ☆34Updated 10 months ago
- ☆41Updated 2 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Domain based annotation of transposable elements☆19Updated 2 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated 7 months ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago