Alternatives and similar repositories for LRSV_combo:

Users that are interested in LRSV_combo are comparing it to the libraries listed below

• evotools / CattleGraphGenomePaper
  Set of script for the paper on the cattle graph genome
  ☆13Updated 2 years ago
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆22Updated last year
• WarrenLab / chicken-pangenome-paper
  Scripts used to perform analyses in Rice et al. (2023)
  ☆15Updated last year
• yangli557 / AnnoSINE
  SINE annotation tool for plant genomes
  ☆17Updated last year
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆23Updated 4 years ago
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 3 years ago
• LAILAB-CAU / update-Mo17
  ☆23Updated last year
• andreaminio / HaploSync
  Tools for haplotype-wise reconstruction of pseudomolecules
  ☆20Updated 4 months ago
• yexinhai / genomics-analysis-pipeline
  Some useful bioinformatics pipelines for genomics analysis
  ☆14Updated 3 years ago
• Uauy-Lab / pangenome-haplotypes
  Scripts to do haplotype analysis on pan genomes.
  ☆21Updated 4 years ago
• glogsdon1 / sunk-based_assembly
  ☆15Updated 3 years ago
• dfguan / pin_hic
  A Hi-C scaffolding method
  ☆22Updated 3 years ago
• yilinZhang-bio / Watermelon-pangenome
  ☆20Updated last year
• comery / Data-Visulization
  issues for semina "Data Visulization"
  ☆13Updated last year
• wtsi-hpag / scanPAV
  Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
  ☆29Updated 6 years ago
• Bean061 / ptgaul
  chloroplast genome assembly using long reads data
  ☆11Updated 2 years ago
• zlguu / Rice_Heterosis
  ☆15Updated last year
• sc-zhang / ALLHiC_extensions
  Some components that speed up and reduce resource cost for original ALLHiC
  ☆12Updated last year
• linguoliang / puzzle-hi-c
  ☆16Updated 2 months ago
• wangziwei08 / LTR-insertion-time-estimation
  ☆15Updated last year
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• YaoZhou89 / WGSc
  ☆16Updated 3 years ago
• clemgoub / rm2gff3
  Convert RepeatMasker ".out" file into a gff3 with colors!!!
  ☆20Updated 4 years ago
• simonhmartin / asynt
  Genome alignment and synteny plots
  ☆28Updated last year
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆23Updated last year
• SwallowGenomics / BarnSwallow
  ☆12Updated 2 years ago
• jnarayan81 / parallelLastz
  parallelLastz: Running Lastz in parallel
  ☆15Updated 5 months ago
• legumeinfo / pandagma
  Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.
  ☆17Updated last week
• schneebergerlab / GameteBinning
  ☆12Updated 4 years ago
• Adamtaranto / TRF2GFF
  Convert Tandem Repeat Finder dat file output into gff3 format
  ☆24Updated 2 months ago