lardo / khaper
☆27Updated 2 years ago
Alternatives and similar repositories for khaper:
Users that are interested in khaper are comparing it to the libraries listed below
- ☆20Updated 7 months ago
- ☆27Updated 3 years ago
- ☆29Updated this week
- Plant genome assembly and annotation pipeline using snakemake☆42Updated last year
- A genome assembly assessment pipeline.☆37Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 weeks ago
- ☆23Updated 3 years ago
- ☆22Updated last year
- ☆32Updated 4 months ago
- ☆29Updated 6 months ago
- ☆21Updated last year
- A tool for performing collinearity-incorporating homology inference☆29Updated last year
- ☆15Updated 3 months ago
- ☆29Updated 2 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆27Updated last month
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆28Updated 2 months ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated 10 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆35Updated 2 months ago
- Genome Annotation Pipeline☆35Updated 7 months ago
- ☆27Updated last year
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆28Updated 2 months ago
- ☆39Updated 2 years ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Updated last year
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆29Updated this week
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- ☆23Updated last year