Alternatives and similar repositories for update-Mo17

Users that are interested in update-Mo17 are comparing it to the libraries listed below

• lurebgi / chicken-T2T
  Scripts that used in our chicken T2T manuscript.
  ☆22Updated 2 years ago
• caasivfbioinfo / Bol_pangenome
  ☆16Updated 2 years ago
• qclian / Pan_Ath
  Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…
  ☆23Updated last year
• yilinZhang-bio / Watermelon-pangenome
  ☆27Updated 2 years ago
• vgteam / giraffe-sv-paper
  ☆44Updated last year
• yiliao1022 / SVGAP
  A pipeline for genomic variant detection with genome assemblies at population scale
  ☆35Updated 7 months ago
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 3 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆18Updated 6 years ago
• dongwei1220 / EasySpeciesTree
  Easily construct the ML species tree with single-copy gene shared by different species.
  ☆27Updated 7 years ago
• qiao-xin / Scripts_for_GB
  The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".
  ☆29Updated 4 years ago
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆29Updated 4 months ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆42Updated 4 years ago
• Immortal2333 / Telomeres_and_Centromeres
  This is a method to find telomeres and centromeres in plants.
  ☆42Updated 2 years ago
• comery / gVisualization
  issues for semina "Data Visulization"
  ☆13Updated 3 weeks ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆34Updated 2 months ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆45Updated last year
• amvarani / Plant_Annotation_TEs
  Methods and recipes for Plant Genome Annotation - Transposable Elements
  ☆20Updated 7 months ago
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• tangerzhang / calc_switchErr
  ☆31Updated 9 months ago
• yiliao1022 / LASTZ_SV_pipeline
  ☆16Updated 6 years ago
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆16Updated 6 months ago
• AnimalGenomicsETH / bovine-graphs
  Integrate multiple genome assemblies into a pangenome graph
  ☆35Updated 3 years ago
• schneebergerlab / GameteBinning_tetraploid
  This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings
  ☆12Updated 4 years ago
• baozg / phased-assembly-check
  ☆32Updated last year
• baduelp / public
  ☆16Updated last year
• NotebookOFXiaoMing / SuperPangenomeofGrapevines
  ☆21Updated last year
• oushujun / PopTEvo
  Study of TE evolution in a population of genomes
  ☆10Updated 2 years ago
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆31Updated 4 years ago
• HuffordLab / Maize_NC358
  The repository for codes developed to generated the Maize NC358 assemblies and analyses.
  ☆10Updated 5 years ago
• Minglc / CisTrans-ECAS
  ☆11Updated last month