lhe17 / nebulaLinks
☆42Updated 3 months ago
Alternatives and similar repositories for nebula
Users that are interested in nebula are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Functional Inference of Gene Regulation☆46Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆87Updated 4 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- ☆47Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆89Updated 3 months ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆57Updated 4 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- R package for analysing single cell data☆58Updated 2 years ago
- R implementation of MULTI-seq sample classification workflow☆64Updated last year
- ☆43Updated 4 years ago
- Normalize CITEseq Data☆66Updated 6 months ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- ☆41Updated 4 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 11 months ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- R package for semi-supervised single-cell data integration☆90Updated last month
- ☆32Updated 8 months ago
- An R toolkit for estimation of cell composition from bulk expression data☆78Updated 3 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 4 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year