Alternatives and similar repositories for ropebwt3:

Users that are interested in ropebwt3 are comparing it to the libraries listed below

• refresh-bio / agc
  Assembled Genomes Compressor
  ☆160Updated 4 months ago
• GeneDx / pgr-tk
  PGR-TK: Pangenome Research Tool Kit
  ☆98Updated 11 months ago
• marschall-lab / panacus
  Panacus is a tool for computing statistics for GFA-formatted pangenome graphs
  ☆99Updated 2 weeks ago
• thegenemyers / FASTGA
  Pairwise whole genome aligner
  ☆151Updated last week
• mourisl / centrifuger
  Classifier for metagenomic sequences using FM-index with run-block compressed BWT.
  ☆56Updated 2 weeks ago
• yukiteruono / pbsim3
  PBSIM3: a simulator for all types of PacBio and ONT long reads
  ☆74Updated last month
• refresh-bio / kmer-db
  Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…
  ☆88Updated 4 months ago
• tobiasrausch / wally
  Wally: Visualization of aligned sequencing reads and contigs
  ☆113Updated 3 months ago
• shenwei356 / unikmer
  A versatile toolkit for k-mers with taxonomic information
  ☆77Updated 7 months ago
• epi2me-labs / wf-basecalling
  ☆37Updated 2 weeks ago
• vikshiv / mumemto
  Mumemto: multi-MUM and MEM finding across pangenomes
  ☆77Updated this week
• colindaven / awesome-pangenomes
  A list of software for pangenomics
  ☆107Updated 3 weeks ago
• kjenike / panagram
  ☆61Updated 2 weeks ago
• yangao07 / longcallD
  A local-haplotagging-based small and structural variant caller
  ☆69Updated last week
• KolmogorovLab / hapdup
  Pipeline to convert a haploid assembly into diploid
  ☆100Updated 2 months ago
• TimD1 / vcfdist
  vcfdist: Accurately benchmarking phased variant calls
  ☆79Updated last week
• PacificBiosciences / trgt
  Tandem repeat genotyping and visualization from PacBio HiFi data
  ☆114Updated last month
• seryrzu / unialigner
  ☆64Updated 11 months ago
• hiruna72 / squigualiser
  Visualise and analyse nanopore (ONT) raw signals
  ☆113Updated 2 months ago
• WGLab / NanoCaller
  Variant calling tool for long-read sequencing data
  ☆106Updated last week
• bcgsc / ntCard
  Estimating k-mer coverage histogram of genomics data
  ☆78Updated last year
• ogotoh / spaln
  Genome mapping and spliced alignment of cDNA or amino acid sequences
  ☆102Updated 2 months ago
• yangao07 / abPOA
  abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
  ☆119Updated last week
• thegenemyers / FASTK
  A fast K-mer counter for high-fidelity shotgun datasets
  ☆124Updated last month
• twolinin / longphase
  ☆109Updated 3 weeks ago
• nadegeguiglielmoni / genome_assembly_tools
  List of genome assembly tools
  ☆61Updated last month
• brentp / vcfexpress
  expressions on VCFs
  ☆79Updated last month
• asl / BandageNG
  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
  ☆122Updated last month
• Dfam-consortium / TETools
  Dfam Transposable Element Tools Docker container.
  ☆89Updated 2 weeks ago
• eblerjana / pangenie
  Pangenome-based genome inference
  ☆127Updated 3 weeks ago