Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model
☆14Oct 19, 2023Updated 2 years ago
Alternatives and similar repositories for SingleCellProteogenomics
Users that are interested in SingleCellProteogenomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- A pipeline to transform images into valuable analysis items☆19Updated this week
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆26Dec 5, 2024Updated last year
- Bedfile perturbation tool☆17Mar 6, 2026Updated 6 months ago
- Snakemake pipeline for microexon discovery and quantification☆21Jan 16, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Nov 23, 2020Updated 5 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- splicing and feature maps for RBPs☆25Sep 8, 2026Updated last week
- ☆15Aug 17, 2023Updated 3 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- UVC, a very accurate small-variant caller (https://doi.org/10.1093/bib/bbab458)☆14May 18, 2025Updated last year
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 3 years ago
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- A collection of functions compatible with the Opentrons API☆10Oct 28, 2022Updated 3 years ago
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.☆20May 26, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 3 years ago
- ☆20Jun 26, 2025Updated last year
- Code associated with MIX-seq manuscript☆15Aug 26, 2020Updated 6 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Jul 13, 2023Updated 3 years ago
- ☆24Jul 29, 2025Updated last year
- ☆11Aug 3, 2018Updated 8 years ago
- Subgraph for Curve.fi☆10Mar 20, 2021Updated 5 years ago
- ☆12Feb 19, 2021Updated 5 years ago
- ☆19Mar 21, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆16Jun 2, 2021Updated 5 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 5 years ago
- ☆16Apr 9, 2021Updated 5 years ago
- A Python package for mapping sequence aligned data onto protein structures☆37May 26, 2021Updated 5 years ago
- CHANGE-seq analysis pipeline☆12Updated this week
- repository containing analysis scripts and auxiliary files☆39Apr 9, 2020Updated 6 years ago
- Code related to scRNA analysis using the scAmpi workflow☆26Jun 24, 2026Updated 2 months ago