CellProfiling / SingleCellProteogenomicsLinks
Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model
☆13Updated last year
Alternatives and similar repositories for SingleCellProteogenomics
Users that are interested in SingleCellProteogenomics are comparing it to the libraries listed below
Sorting:
- ☆12Updated 4 years ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 4 years ago
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated last year
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Updated 2 years ago
- Snakemake pipeline for microexon discovery and quantification☆20Updated 6 months ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- Perturb-seq analysis package☆14Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆34Updated 3 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- ☆20Updated last year
- ☆12Updated 4 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆15Updated 5 years ago
- Detecting cancer subtypes with machine learning.☆10Updated 5 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- A collection of perl scripts for NGS analysis☆16Updated 9 months ago
- Workflow for analysis of healthy human kidney by snRNAseq and snATACseq☆24Updated 2 years ago
- ☆17Updated last year
- functions and algorithms for single cell RNA-seq analyses☆12Updated 4 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆23Updated 3 years ago
- Paired-seq☆14Updated last year
- Improved Ribo-seq enables identification of cryptic translation events☆14Updated 7 years ago
- scGRO-seq analyses codes☆13Updated last year
- Explore the cancer relevance of your gene list☆51Updated 4 months ago
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- ☆12Updated 2 years ago
- scover☆23Updated last year