Analysis pipeline for our circSC manuscript
☆14May 18, 2022Updated 3 years ago
Alternatives and similar repositories for Code_for_circSC
Users that are interested in Code_for_circSC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- miRTrace☆12Jun 14, 2023Updated 2 years ago
- ☆18Oct 4, 2022Updated 3 years ago
- ☆10Mar 11, 2025Updated last year
- Circular RNA Identification for Nanopore Sequencing☆22May 23, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆19Oct 4, 2025Updated 6 months ago
- BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.☆12Sep 7, 2022Updated 3 years ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Nov 27, 2020Updated 5 years ago
- Find circRNAs in RNA-seq data.☆15Jul 5, 2016Updated 9 years ago
- Awk, bash, python scripts for processing NGS data☆14Nov 6, 2015Updated 10 years ago
- ☆12Dec 15, 2020Updated 5 years ago
- Identify major cellular signals in bulk transcriptomes☆11Jun 1, 2022Updated 3 years ago
- circular RNA quantification tools☆31Jun 17, 2024Updated last year
- direct comparison of circular and linear RNA expression☆24Jan 17, 2021Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- R package of CSOmap(developing☆13Mar 22, 2022Updated 4 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆20Dec 1, 2024Updated last year
- ChIA-PET Utilities☆13Dec 19, 2021Updated 4 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.☆19May 26, 2025Updated 10 months ago
- High-Performance Computing in Bioinformatics☆22May 16, 2022Updated 3 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 4 years ago
- ☆19Jul 8, 2021Updated 4 years ago
- Killer tools/packages/libraries/websits/...☆21Mar 25, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆21Apr 7, 2025Updated last year
- 在R语言中使用ChatGPT(中国大陆版)☆12Mar 17, 2023Updated 3 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 2 years ago
- ☆12Apr 4, 2026Updated last week
- DIseAse MODule identification algorithim☆20Jan 28, 2021Updated 5 years ago
- R interface to megadepth: BigWig and BAM related utilities☆13Mar 31, 2026Updated last week
- ☆49Nov 7, 2024Updated last year
- DEAPP shiny App☆30Jun 8, 2022Updated 3 years ago
- A repo with supplementary material for a manuscript on the origin of SARS-CoV-2 origins☆11Jun 26, 2020Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Jun 27, 2020Updated 5 years ago
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- 2022-10-27 R-Ladies St. Louis Presentation☆10Oct 28, 2022Updated 3 years ago
- ☆15Jun 2, 2021Updated 4 years ago
- Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms☆33Jul 14, 2017Updated 8 years ago
- We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies☆18Feb 4, 2022Updated 4 years ago