bioinfo-biols / Code_for_circSCLinks
Analysis pipeline for our circSC manuscript
☆14Updated 3 years ago
Alternatives and similar repositories for Code_for_circSC
Users that are interested in Code_for_circSC are comparing it to the libraries listed below
Sorting:
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 5 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 2 years ago
- ☆18Updated 5 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 3 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated last week
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 7 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆17Updated last year
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆22Updated 3 months ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆17Updated 4 years ago
- ☆51Updated last year
- ☆17Updated 6 years ago
- ☆17Updated 2 years ago
- ☆18Updated 2 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 4 years ago
- ☆25Updated 3 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- ☆26Updated 2 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Updated 2 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- ☆12Updated 4 years ago
- ☆20Updated 2 years ago
- GENome Organisation Visual Analytics☆15Updated 3 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 6 years ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Updated last year
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year