vals / python-gprofilerLinks
☆12Updated 6 years ago
Alternatives and similar repositories for python-gprofiler
Users that are interested in python-gprofiler are comparing it to the libraries listed below
Sorting:
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆28Updated last year
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Updated 8 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- ☆12Updated last year
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- kallisto index tag extractor☆20Updated 6 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Updated 6 years ago
- scRNA-seq data visualization from scrattch☆27Updated last week
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- ☆21Updated 8 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Single sample network reconstruction in R☆23Updated 5 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 4 months ago
- Interface to 10x Genomics' 1.3 m single cell data set☆18Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year