noefp / easy_gdbLinks
☆13Updated last week
Alternatives and similar repositories for easy_gdb
Users that are interested in easy_gdb are comparing it to the libraries listed below
Sorting:
- run-length BWT tools for genomic sequences☆19Updated 3 years ago
- This is the GPress, a framework for querying GTF, GFF3 and expression files in a compressed form.☆12Updated 2 years ago
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- CLI to automate Nextflow pipeline testing☆12Updated 3 weeks ago
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆16Updated last year
- Rapid and accurate ancestry inference using SNVs.☆28Updated 3 months ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- Teaching modules for Human Genome Variation Lab.☆20Updated 5 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆10Updated last year
- Unfazed by genomic variant phasing☆27Updated last year
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- ☆12Updated 2 months ago
- Nanopore Real-Time Analysis Tool☆15Updated last year
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 7 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Updated 5 years ago
- MEM mapper prototype☆13Updated 4 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆25Updated last month
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13Updated last year
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆16Updated 4 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Updated 3 years ago
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆13Updated 3 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- ☆14Updated 2 years ago
- A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers☆22Updated 6 years ago
- k-mer similarity analysis pipeline☆23Updated last month
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Toolkit for calling and analyzing de novo STR mutations☆17Updated last year
- All JBrowse plugins created by Brigitte Hofmeister☆10Updated 7 years ago
- Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.☆21Updated 6 years ago