kcakdemir / HiCPlotter
“When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
☆17Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for HiCPlotter
- ☆15Updated 2 years ago
- ☆21Updated 2 years ago
- ☆22Updated last year
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- A tool for performing collinearity-incorporating homology inference☆27Updated last year
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆17Updated 5 months ago
- Plant genome assembly and annotation pipeline using snakemake☆35Updated last year
- The tools are used for displaying hic signal of genome☆22Updated 3 years ago
- ☆22Updated 2 months ago
- ☆14Updated 10 months ago
- ☆20Updated 3 months ago
- A pipeline for isoseq☆23Updated 6 years ago
- Genome haplotype assembly and assessment method☆11Updated 11 months ago
- methods for orphan gene prediction paper optimization☆25Updated 2 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Updated 11 months ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆13Updated 4 months ago
- Integrate multiple genome assemblies into a pangenome graph☆32Updated 2 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆11Updated last month
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆19Updated last year
- B73Ab10 genome assembly methods☆16Updated 2 years ago
- ☆24Updated 3 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆23Updated 7 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆29Updated 2 months ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆11Updated 4 years ago
- ☆20Updated 8 months ago
- conserved non-coding sequence☆14Updated 2 years ago
- ☆21Updated 2 years ago
- ☆16Updated 2 years ago