unavailable-2374 / Genome-Wide-Annotation-Pipeline
This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.
☆23Updated last year
Alternatives and similar repositories for Genome-Wide-Annotation-Pipeline:
Users that are interested in Genome-Wide-Annotation-Pipeline are comparing it to the libraries listed below
- Dynamic Elongation of a Genome Assembly Path☆21Updated 10 months ago
- Genome haplotype assembly and assessment method☆12Updated last year
- This is a method to find telomeres and centromeres in plants.☆40Updated last year
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆29Updated 2 months ago
- ☆24Updated 3 years ago
- ☆29Updated 7 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆28Updated 2 months ago
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- Centromics: visualing centromeres with multiple omics data☆18Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆42Updated last year
- ☆20Updated 7 months ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆19Updated last year
- Centromics: visualing centromeres with multiple omics data☆22Updated last month
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 9 months ago
- A tool for performing collinearity-incorporating homology inference☆29Updated last year
- ☆21Updated last year
- ☆39Updated last year
- ☆27Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆23Updated 3 weeks ago
- HiCAT new project☆27Updated last year
- Graph-based Sequence Assembly Toolkit☆19Updated 4 months ago
- ☆29Updated 3 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 6 months ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆30Updated last week
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆31Updated 6 months ago
- ☆27Updated 3 years ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆17Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆37Updated 3 weeks ago
- ☆24Updated last year