data-fun / 3d-genome-builderLinks
3DGB is a workflow to build 3D models of genomes from HiC data
☆13Updated 2 weeks ago
Alternatives and similar repositories for 3d-genome-builder
Users that are interested in 3d-genome-builder are comparing it to the libraries listed below
Sorting:
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- Pan-3D genome analysis of soybean Hi-C data☆12Updated 2 years ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆23Updated 2 months ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 7 months ago
- ☆16Updated 2 years ago
- ☆20Updated last week
- Invertory of TE-gene isoforms☆14Updated 2 years ago
- ☆17Updated 5 years ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆10Updated 5 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- Enabling differential allele-specific analysis☆11Updated last year
- ☆23Updated 3 years ago
- B73Ab10 genome assembly methods☆16Updated 4 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Updated last year
- ☆14Updated 7 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Characterization of Structural Variation in Chinese samples☆18Updated 4 years ago
- Identification of conserved non-coding sequences in plants☆32Updated this week
- ☆16Updated 3 years ago
- Whole Genome Annotation Pipeline☆16Updated 7 months ago
- Long Read Based SV Calling Tools Analysis☆14Updated last year
- The complete sequence of a Chinese individual☆11Updated last year
- Methylation analysis pipeline for genome graph☆14Updated 8 months ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆36Updated 6 years ago
- conserved non-coding sequence☆16Updated 3 years ago
- ☆29Updated 2 years ago
- Snakemake pipeline to analyze transposable element 'omics data.☆30Updated 3 weeks ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 7 months ago