Alternatives and similar repositories for Inspector:

Users that are interested in Inspector are comparing it to the libraries listed below

• ChongLab / Inspector
  A tool for evaluate long-read de novo assembly results
  ☆42Updated 4 months ago
• schneebergerlab / fixchr
  ☆15Updated last month
• CAFS-bioinformatics / LR_Gapcloser
  use long sequenced reads to close gaps in assemblies
  ☆36Updated 6 years ago
• JanaSperschneider / FindTelomeres
  A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
  ☆32Updated 2 years ago
• baozg / phased-assembly-check
  ☆28Updated 2 weeks ago
• schmeing / gapless
  Gapless provides combined scaffolding, gap-closing and assembly correction with long reads
  ☆35Updated last year
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• shelkmike / Mabs
  Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye
  ☆28Updated last month
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆34Updated 4 months ago
• ablab / VerityMap
  ☆34Updated last year
• daewoooo / SVbyEye
  ☆74Updated 3 months ago
• rlorigro / GFAse
  Tool for globally phasing diploid assembly graphs with orthogonal data
  ☆39Updated last month
• yanyew / SynGAP
  ☆31Updated 2 months ago
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆34Updated 2 years ago
• caaswxb / SRY
  SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome.
  ☆18Updated last year
• i10labtitech / GINGER
  ☆27Updated last year
• Adamtaranto / teloclip
  A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
  ☆35Updated 3 weeks ago
• ablab / TandemTools
  Tool for assessing/improving assembly quality in extra-long tandem repeats
  ☆46Updated 3 years ago
• mapleforest / HaploMerger2
  ☆43Updated 8 years ago
• ShiuLab / PseudogenePipeline
  ☆36Updated last year
• micahvista / VACmap
  VACmap: a long-read aligner specifically designed for complex structural variation discovery
  ☆30Updated last month
• shingocat / lrscaf
  TGS scaffolding
  ☆46Updated 3 years ago
• dfguan / asset
  assembly evaluation tool
  ☆34Updated 2 years ago
• piosierra / pantera
  Identification of transposable element families from pangenome polymorphisms
  ☆43Updated 5 months ago
• Kuanhao-Chao / LiftOn
  🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies
  ☆70Updated last month
• ohdongha / OrthNet
  CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…
  ☆9Updated 2 years ago
• JiaoLab2021 / EVG
  A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads
  ☆37Updated 6 months ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆36Updated 4 months ago
• slimsuite / chromsyn
  Chromosome-level synteny plotting using orthologous regions
  ☆28Updated 4 months ago
• HullUni-bioinformatics / TE-search-tools
  Python wrappers for programs that search for transposable elements
  ☆19Updated 8 years ago