A tool for evaluating long-read de novo assembly results
☆55Aug 25, 2024Updated 2 years ago
Alternatives and similar repositories for Inspector
Users that are interested in Inspector are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for evaluate long-read de novo assembly results☆52Aug 28, 2024Updated 2 years ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).☆118Jul 23, 2024Updated 2 years ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆96Dec 3, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PECAT, a phased error correct and assembly tool☆68Dec 8, 2025Updated 9 months ago
- De novo assembly from Oxford Nanopore reads.☆89Jun 29, 2026Updated 2 months ago
- Extracting paths from assembly graphs☆26Jun 22, 2026Updated 3 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆39Mar 5, 2023Updated 3 years ago
- Linear-time de novo Long Read Assembler☆43Mar 19, 2026Updated 6 months ago
- Dynamic Elongation of a Genome Assembly Path☆28Jul 27, 2026Updated last month
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year
- FamDB file format library and utilities☆49Jun 1, 2026Updated 3 months ago
- Minimizer-based assembly scaffolding and mapping using long reads☆54Apr 1, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Aug 22, 2023Updated 3 years ago
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Sep 18, 2019Updated 7 years ago
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- A genome assembly assessment pipeline.☆39Jun 5, 2026Updated 3 months ago
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆42Feb 15, 2025Updated last year
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Aug 24, 2026Updated 3 weeks ago
- A nextflow pipeline for polishing CLR assemblies☆18Feb 3, 2023Updated 3 years ago
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2026Updated last week
- ☆13Nov 15, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 5 years ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Sep 1, 2026Updated 3 weeks ago
- ☆27Jun 27, 2026Updated 2 months ago
- ☆33Mar 3, 2026Updated 6 months ago
- Evaluating genome assemblies☆127Mar 3, 2026Updated 6 months ago
- ☆45Dec 11, 2025Updated 9 months ago
- Pipeline to convert a haploid assembly into diploid☆113Jan 23, 2025Updated last year
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- haplotypic duplication identification tool☆295Oct 30, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆12Jun 12, 2023Updated 3 years ago
- Convert HAL to VG☆24Sep 15, 2026Updated last week
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆37Apr 20, 2026Updated 5 months ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆18Jan 24, 2026Updated 7 months ago
- ☆94Jul 31, 2026Updated last month
- This is the standalone version of the EviAnn pipeline☆186Sep 10, 2026Updated last week
- k-mer based assembly evaluation☆355Jul 6, 2026Updated 2 months ago