Experimental design framework for scRNAseq population studies (eQTL and DE)
☆46Jan 8, 2025Updated last year
Alternatives and similar repositories for scPower
Users that are interested in scPower are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆21Apr 14, 2025Updated 11 months ago
- ☆24Mar 30, 2026Updated last week
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆22Feb 2, 2026Updated 2 months ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆152Feb 13, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Analysis of cell-cell communication at single-cell resolution☆106Sep 10, 2024Updated last year
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Jan 7, 2020Updated 6 years ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆319Nov 1, 2022Updated 3 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆28May 15, 2024Updated last year
- Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".☆14Nov 20, 2020Updated 5 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆117Sep 29, 2025Updated 6 months ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆24Aug 20, 2024Updated last year
- R package for Bioconductor submission☆40Dec 8, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Network Visualization using both GUI and Programming☆29May 27, 2025Updated 10 months ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆76Feb 27, 2023Updated 3 years ago
- Interfaces for HDF5-based Single Cell File Formats☆176Nov 4, 2023Updated 2 years ago
- R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations☆32May 12, 2020Updated 5 years ago
- A Shiny web app for mapping datasets using Seurat v4☆144Nov 5, 2024Updated last year
- A package to help convert different single-cell data formats to each other☆462Feb 20, 2026Updated last month
- scVI extension for unspliced RNA☆15May 18, 2025Updated 10 months ago
- To reveal the cellular heterogeneity within flow cytometry data, clustering and pseudotime analysis can be performed. Here, we demonstrat…☆14Jul 5, 2022Updated 3 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Oct 23, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Genomic Features in Python from BioConductor's AnnotationHub☆23Mar 30, 2026Updated last week
- Multi-sample multi-group scRNA-seq analysis tools☆223Mar 25, 2026Updated 2 weeks ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Dec 5, 2023Updated 2 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 2 months ago
- An R package designed to demultiplex cell hashing data☆31Feb 10, 2026Updated 2 months ago
- BioCarta pathway images☆11Jan 30, 2026Updated 2 months ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 4 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆11Dec 4, 2023Updated 2 years ago
- LIANA: a LIgand-receptor ANalysis frAmework☆238Aug 7, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆295Updated this week
- Single-cell Hierarchical Poisson Factorization☆75Feb 14, 2026Updated last month
- cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data☆145Apr 5, 2024Updated 2 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆15Mar 22, 2018Updated 8 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆118Apr 26, 2025Updated 11 months ago
- ☆10Aug 12, 2018Updated 7 years ago
- simpler single cell RNAseq data Visualization☆10Feb 28, 2025Updated last year