Teichlab / innate_evo
☆12Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for innate_evo
- R package for robust clustering of single cell RNA sequencing data☆38Updated last year
- Toolbox with R scripts☆37Updated 6 years ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆69Updated 3 years ago
- ☆53Updated 3 years ago
- Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory …☆12Updated last year
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 3 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆41Updated 11 months ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated last year
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Updated 5 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆27Updated 9 months ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆72Updated 2 months ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆21Updated last week
- ☆37Updated 2 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆42Updated last year
- ATAC-seq Quality Control☆22Updated last week
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆31Updated 5 years ago
- scRNA-seq cell type identification☆41Updated 5 years ago
- ☆18Updated 7 months ago
- Single cell RNA-seq analysis bundle☆33Updated 5 years ago
- ☆11Updated 4 months ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆41Updated 9 months ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆23Updated 3 years ago
- Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…☆10Updated 7 years ago
- R package to visualize scRNA sequencing data.☆20Updated 2 years ago
- R package for robust clustering of single cell RNA sequencing data☆34Updated 7 months ago
- Toolkit for Single-Cell Velocity☆55Updated 3 weeks ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 5 years ago
- Figure depicting the breadth of multimodal scRNA-seq technologies☆15Updated 5 years ago